To (i) document vertical distributions of bacterial diversity and community composition, (ii) investigate how these communities vary from one oceanographic region to another, and (iii) test the extent to which bacterial communities of deep subseafloor sediment may originate in the water column, we used 454 pyrosequencing technology and the v4-v6 hypervariable region of the bacterial 16S rRNA gene to examine bacterial community composition (presence/absence and relative abundance) in the water column, near-seafloor sediment (5 cm), and subseafloor sediment at three environmentally distinct Pacific sites: the very high-productivity eastern equatorial upwelling region (EQP1), the moderately high-productivity open-ocean central equatorial upwelling region (EQP8) and the very low-productivity northern gyre (EQP11) (Figure 1).
| Accession | PRJNA285485 |
| Data Type | Targeted loci environmental |
| Scope | Environment |
| Organism | marine metagenome[Taxonomy ID: 408172] unclassified sequences; metagenomes; ecological metagenomes; marine metagenome |
| Grants | - "Microbial Population Structure of the World’s Oceans" (Grant ID DT063006, W. M. Keck Foundation)
- "Oceanographic Control And Global Distributions Of Subseafloor Microbial Life And Activity" (Grant ID OCE-0752336, National Science Foundation)
- "Center for Dark Energy Biosphere Investigations" (Grant ID OCE-0939564, National Science Foundation)
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| Submission | Registration date: 1-Jun-2015 Marine Biological Laboratory |
| Related Resources | |
| Relevance | Environmental |
Project Data:
| Resource Name | Number of Links |
|---|
| Sequence data |
| SRA Experiments | 39 |
| Other datasets |
| BioSample | 39 |