This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA285106; GEO: GSE69303 |
| Type | Umbrella project |
| Publications | - Warwick T et al., "A hierarchical regulatory network analysis of the vitamin D induced transcriptome reveals novel regulators and complete VDR dependency in monocytes.", Sci Rep, 2021 Mar 22;11(1):6518
- Seuter S et al., "Epigenome-wide effects of vitamin D and their impact on the transcriptome of human monocytes involve CTCF.", Nucleic Acids Res, 2016 May 19;44(9):4090-104
|
| Submission | Registration date: 27-May-2015
Institute of Biomedicine, University of Eastern Finland |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 41 |
| Publications |
| PubMed | 3 |
| PMC | 2 |
| Other datasets |
| BioSample | 41 |
| GEO DataSets | 4 |
1,25(OH)2D3 time course in THP-1 cells encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA285102 | Homo sapiens | FAIRE-seq 1,25(OH)2D3 time course in THP-1 cells (Institute of Biomedicine,...) | | PRJNA287278 | Homo sapiens | CTCF ChIP-seq in human monocytic THP-1 cells with replicates (4) (Institute of Biomedicine,...) |
|
| Transcriptome or Gene expression | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA285092 | Homo sapiens | RNA-seq 1,25(OH)2D3 time course in THP-1 cells (Institute of Biomedicine,...) |
|