This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA285088; GEO: GSE69291 |
| Type | Umbrella project |
| Publications | Lu C et al., "Histone H3K36 mutations promote sarcomagenesis through altered histone methylation landscape.", Science, 2016 May 13;352(6287):844-9 |
| Submission | Registration date: 27-May-2015
Room 2174, Wisconsin Institute for Discovery, Department of Biomolecular Chemistry, University of Wisconsin-Madison |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 69 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 69 |
| GEO DataSets | 10 |
H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation encompasses the following 9 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 5 |
BioProject
accession | Name | Title |
|---|
| PRJNA305536 | H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [H31_ChIP-Rx] | H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [H31_ChIP-Rx] (Room 2174, Wisconsin Institute...) | | PRJNA285090 | Mus musculus | H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [ChIP-Rx] (Room 2174, Wisconsin Institute...) | | PRJNA285084 | Mus musculus | H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [Ring1b_ChIP] (Room 2174, Wisconsin Institute...) | | PRJNA305538 | Mus musculus | H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [Cbx2_ChIP] (Room 2174, Wisconsin Institute...) | | PRJNA305539 | Mus musculus | H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [HA-H33-H31_ChIP] (Room 2174, Wisconsin Institute...) |
|
| Transcriptome or Gene expression | 4 |
BioProject
accession | Organism | Title |
|---|
| PRJNA305540 | Homo sapiens | H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [RNA_Chondroblastoma_H3K36M_H3WT] (Room 2174, Wisconsin Institute...) | | PRJNA285074 | Mus musculus | H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [RNA_H31K36M_H33LAIMR] (Room 2174, Wisconsin Institute...) | | PRJNA285080 | Mus musculus | Histone H3K36M mutation impairs mesenchymal differentiation and drives sarcoma development [RNA_H33_K36M_HMT] (Room 2174, Wisconsin Institute...) | | PRJNA305537 | Mus musculus | H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [Ring1a-1b_RNASeq] (Room 2174, Wisconsin Institute...) |
|