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Accession: PRJNA284487 ID: 284487

Comparative transcriptome analysis in response to heat stress in Arabidopsis thaliana and Arabidopsis lyrata

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This project is a component of the Arabidopsis lyrata gene annotation using RNA-sequencing data
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1 additional project is a component of the Arabidopsis lyrata gene annotation using RNA-sequencing data.
Arabidopsis thaliana and Arabidopsis lyrata are two closely related Brassicaceae species, which are used as models for plant comparative biology. More...
AccessionPRJNA284487; GEO: GSE69077
Data TypeTranscriptome or Gene expression
ScopeMultispecies
Publications
  • Pietzenuk B et al., "Recurrent evolution of heat-responsiveness in Brassicaceae COPIA elements.", Genome Biol, 2016 Oct 11;17(1):209
  • Rawat V et al., "Improving the Annotation of Arabidopsis lyrata Using RNA-Seq Data.", PLoS One, 2015;10(9):e0137391
SubmissionRegistration date: 20-May-2015
Pecinka group, Centre of Plant Structural and Functional Genomics, Institute of Experimental Botany
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Publications
PubMed2
PMC2
Other datasets
BioSample12
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes14
SRA Data Details
ParameterValue
Data volume, Gbases29
Data volume, Mbytes21249

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