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Accession: PRJNA28435 ID: 28435

coral metagenome

Microbial community from coral

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This project is a component of the Viral and microbial metagenomes isolated from Porites compressa following various stress experiments
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12 additional projects are components of the Viral and microbial metagenomes isolated from Porites compressa following various stress experiments.
Microbes were collected from whole Porites compressa tissue extracts (originally collected at 21. More...
AccessionPRJNA28435
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismcoral metagenome[Taxonomy ID: 496922]
unclassified sequences; metagenomes; organismal metagenomes; coral metagenome
Publications
  • Vega Thurber R et al., "Metagenomic analysis of stressed coral holobionts.", Environ Microbiol, 2009 Aug;11(8):2148-63
  • Dinsdale EA et al., "Functional metagenomic profiling of nine biomes.", Nature, 2008 Apr 3;452(7187):629-32
SubmissionRegistration date: 24-Apr-2008
SDSU Center for Universal Microbial Sequencing
NCBI Links
Locus Tag PrefixAM3
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)1
SRA Experiments1
Publications
PubMed2
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_000206985.1ContigABNU00000000SAMN00000170
coral metagenome
SRA Data Details
ParameterValue
Data volume, Mbases8
Data volume, Mbytes21

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