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Accession: PRJNA28433 ID: 28433

coral metagenome

Microbial community from coral

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This project is a component of the Viral and microbial metagenomes isolated from Porites compressa following various stress experiments
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12 additional projects are components of the Viral and microbial metagenomes isolated from Porites compressa following various stress experiments.
Microbes were collected from whole Porites compressa tissue extracts (originally collected at 21. More...
AccessionPRJNA28433
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismcoral metagenome[Taxonomy ID: 496922]
unclassified sequences; metagenomes; organismal metagenomes; coral metagenome
Publications
  • Vega Thurber R et al., "Metagenomic analysis of stressed coral holobionts.", Environ Microbiol, 2009 Aug;11(8):2148-63
  • Dinsdale EA et al., "Functional metagenomic profiling of nine biomes.", Nature, 2008 Apr 3;452(7187):629-32
SubmissionRegistration date: 24-Apr-2008
SDSU Center for Universal Microbial Sequencing
NCBI Links
Locus Tag PrefixAKY
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)1
SRA Experiments1
Publications
PubMed2
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_000207005.1ContigABNT00000000SAMN00000169
coral metagenome
SRA Data Details
ParameterValue
Data volume, Mbases8
Data volume, Mbytes21

Supplemental Content

Related information

NCBI Links

Related Resources

LinkOut to external resources

  • GOLD: Gp0051447 [Genomes On Line Database]
    GOLD: Gp0051447
    Genomes On Line Database

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