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Accession: PRJNA283747 ID: 283747

Staphylococcus aureus

Staphylococcus aureus Genome sequencing and assembly

See Genome Information for Staphylococcus aureus
The goal of the study was to investigate patient-to-patient transmission events of Staphylococcus aureus in a health care center during wound care and screened for the presence of antibiotic resistance genes that conferred antibiotic resistance.
AccessionPRJNA283747
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismStaphylococcus aureus[Taxonomy ID: 1280]
Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
PublicationsAmissah NA et al., "Molecular Characterization of Staphylococcus aureus Isolates Transmitted between Patients with Buruli Ulcer.", PLoS Negl Trop Dis, 2015;9(9):e0004049
SubmissionRegistration date: 23-Sep-2015
Noguchi Memorial Institute for Medical Research, University of Ghana
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)778
WGS master21
SRA Experiments21
Publications
PubMed1
PMC1
Other datasets
BioSample21
Assembly21
Assembly details:
Assembly levelNumber of Assemblies
4
17
21
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001297685.1ContigLGAE00000000SAMN03658606
BU_G1001_t8
GCA_001297665.1ContigLFTW00000000SAMN03658608
BU_G0706B_t8
GCA_001297635.1ContigLFTV00000000SAMN03658607
BU_N17W_t2
GCA_001297625.1ContigLFTU00000000SAMN03658605
BU_G1101_t2
GCA_001297605.1ContigLFTT00000000SAMN03658602
BU_W12_t13
GCA_001297525.1ContigLFNK00000000SAMN03658593
BU_W22_t4
GCA_001297555.1ScaffoldLFNS00000000SAMN03658601
BU_N22_t6
GCA_001297535.1ScaffoldLFNP00000000SAMN03658598
BU_G1201_t13
GCA_001297545.1ContigLFNM00000000SAMN03658595
BU_N17Y_t2
GCA_001297445.1ContigLFNQ00000000SAMN03658599
BU_G1201_t8
GCA_001297465.1ContigLFOG00000000SAMN03658603
BU_G0301_t8
GCA_001297475.1ContigLFNR00000000SAMN03658600
BU_G2601A_t9
GCA_001297455.1ContigLFNN00000000SAMN03658596
BU_N3_t2
GCA_001297365.1ContigLFNO00000000SAMN03658597
BU_W6_t1
GCA_001297395.1ContigLFNH00000000SAMN03658592
BU_W13_t1
GCA_001297415.1ContigLFNI00000000SAMN03658589
BU_G0701_t5
GCA_001297375.1ScaffoldLFOH00000000SAMN03658604
BU_G1074_t4
GCA_001297315.1ScaffoldLFNJ00000000SAMN03658591
BU_G1905_t3
GCA_001297305.1ContigLFMH00000000SAMN03658590
BU_G0202_t2
GCA_001297285.1ContigLFNL00000000SAMN03658594
BU_W7A_t11
GCA_001297295.1ContigLFMG00000000SAMN03658588
BU_G0201_t8
SRA Data Details
ParameterValue
Data volume, Gbases5
Data volume, Mbytes2379

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