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Accession: PRJNA28359 ID: 28359

saltern metagenome

Microbial metagenome isolated from low salinity saltern

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This project is a component of the Viral and microbial metagenomes from salterns of differing salinities
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19 additional projects are components of the Viral and microbial metagenomes from salterns of differing salinities.
Microbial community from a "low" salinity saltern in San Diego, CA (32.599040, -117. More...
AccessionPRJNA28359
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismsaltern metagenome[Taxonomy ID: 496920]
unclassified sequences; metagenomes; ecological metagenomes; saltern metagenome
PublicationsDinsdale EA et al., "Functional metagenomic profiling of nine biomes.", Nature, 2008 Apr 3;452(7187):629-32
SubmissionRegistration date: 24-Apr-2008
SDSU Center for Universal Microbial Sequencing
NCBI Links
Locus Tag PrefixAGW
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)1
SRA Experiments1
Publications
PubMed1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_000207625.1ContigABMI00000000SAMN00000133
saltern metagenome
SRA Data Details
ParameterValue
Data volume, Mbases31
Data volume, Mbytes80

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  • GOLD: Gp0051135 [Genomes On Line Database]
    GOLD: Gp0051135
    Genomes On Line Database

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