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Accession: PRJNA28347 ID: 28347

marine metagenome

Marine microbial metagenome isolated from Christmas Atoll

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This project is a component of the Microbial and Viral Marine Metagenomes from Northern Line Islands
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7 additional projects are components of the Microbial and Viral Marine Metagenomes from Northern Line Islands.
Microbial fraction (100-0.45 micron) collected August 5, 2005, from water below the boundary layer (e. More...
AccessionPRJNA28347
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismmarine metagenome[Taxonomy ID: 408172]
unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Publications
  • Dinsdale EA et al., "Microbial ecology of four coral atolls in the Northern Line Islands.", PLoS One, 2008 Feb 27;3(2):e1584
  • Dinsdale EA et al., "Functional metagenomic profiling of nine biomes.", Nature, 2008 Apr 3;452(7187):629-32
SubmissionRegistration date: 24-Apr-2008
SDSU Center for Universal Microbial Sequencing
NCBI Links
Locus Tag PrefixAGK
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)1
SRA Experiments1
Publications
PubMed2
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_000207745.1ContigABMC00000000SAMN00000128
marine metagenome
SRA Data Details
ParameterValue
Data volume, Mbases30
Data volume, Mbytes77

Supplemental Content

Related information

NCBI Links

Related Resources

LinkOut to external resources

  • GOLD: Gp0051108 [Genomes On Line Database]
    GOLD: Gp0051108
    Genomes On Line Database

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