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Accession: PRJNA28343 ID: 28343

marine metagenome

Marine microbial metagenome isolated from Kingman Atoll

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This project is a component of the Microbial and Viral Marine Metagenomes from Northern Line Islands
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7 additional projects are components of the Microbial and Viral Marine Metagenomes from Northern Line Islands.
Microbial fraction (100-0.45 micron) collected August 21, 2005, from water below the boundary layer (e. More...
AccessionPRJNA28343
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismmarine metagenome[Taxonomy ID: 408172]
unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Publications
  • Dinsdale EA et al., "Microbial ecology of four coral atolls in the Northern Line Islands.", PLoS One, 2008 Feb 27;3(2):e1584
  • Dinsdale EA et al., "Functional metagenomic profiling of nine biomes.", Nature, 2008 Apr 3;452(7187):629-32
SubmissionRegistration date: 24-Apr-2008
SDSU Center for Universal Microbial Sequencing
NCBI Links
Locus Tag PrefixAGG
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)1
SRA Experiments1
Publications
PubMed2
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_000207785.1ContigABMA00000000SAMN00000126
marine metagenome
SRA Data Details
ParameterValue
Data volume, Mbases28
Data volume, Mbytes72

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