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Accession: PRJDB1823 ID: 283362

Chamaecyparis obtusa

Transcriptome analysis of the Hinoki differentiating xylem using SOLiD paired-end sequencing

To understand the molecular mechanisms underlying compression wood formation, we performed large-scale transcriptome sequencing of Hinoki differentiating xylem, and compared the gene expression profiles between normal and compression woods.
AccessionPRJDB1823; SRA: DRP001078
OrganismChamaecyparis obtusa[Taxonomy ID: 13415]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinopsida; Pinidae; Conifers II; Cupressales; Cupressaceae; Chamaecyparis; Chamaecyparis obtusa
Publications
  • Published online: Sato S et al., "Transcriptome Analysis of Reaction Wood in Gymnosperms by Next-Generation Sequencing", American Journal of Plant Sciences, 2014;05(18):2785-2798
SubmissionRegistration date: 7-May-2015
Bio-material Physics
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Other datasets
BioSample6
SRA Data Details
ParameterValue
Data volume, Gbases13
Data volume, Mbytes7513

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