We used 454 pyrosequencing technology of the internal transcribed spacer (ITS) region of ribosomal DNA to study the effects of different harvest methods and dates on epiphytic fungal communities naturally associated with barley seeds.
| Accession | PRJNA283143 |
| Data Type | Targeted loci environmental |
| Scope | Environment |
| Organism | seed metagenome[Taxonomy ID: 1335591] unclassified sequences; metagenomes; organismal metagenomes; seed metagenome |
| Grants | - "Next generation sequencing, direct detection and genotyping of fungi, bacteria and nematodes in the agri-food system" (Grant ID CRTI 09-462RD/CSSP 30vv01, Canadian Safety and Security Program)
- "Effect of harvesting methods and seed source on quality and yield of malting barley" (Grant ID DIAP#05042/AGR-05840, Barley DIAP under Agriculture and Agri-Food Canada)
- "Development of identification and analysis tools for amplicon-based metagenomics, focussing on high risk and regulated pathogens" (Grant ID AAFC#J-000011, Agriculture & Agri-Food Canada)
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| Submission | Registration date: 5-May-2015
Agriculture and Agri-Food Canada |
| Relevance | Agricultural |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 4 |
| Other datasets |
| BioSample | 76 |