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Accession: PRJNA283002 ID: 283002

Using RNA Seq to define the regulon of the Pseudomonas aeruginosa transcription factor Anr in low-oxygen colony biofilms.

Purpose : The goal of this study was to use RNA Seq to define the regulon of the transciption factor Anr by comparing global transcriptional profiles of Pseudomonas aeruginosa strain PAO1 and a clinical isolate with their isogenic ∆anr mutants, grown in colony biofilms at 1% oxygen. More...
AccessionPRJNA283002; GEO: GSE68534
Data TypeTranscriptome or Gene expression
ScopeMultispecies
PublicationsHammond JH et al., "Links between Anr and Quorum Sensing in Pseudomonas aeruginosa Biofilms.", J Bacteriol, 2015 Sep;197(17):2810-20
SubmissionRegistration date: 4-May-2015
Microbiology and Immunology, Geisel School of Medicine at Dartmouth
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments8
Publications
PubMed1
PMC1
Other datasets
BioSample8
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases10
Data volume, Mbytes6734

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