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Accession: PRJNA282954 ID: 282954

human oral metagenome

Human oral bacterial isolates Genome sequencing

Forsyth oral bacterial genomes isolated in pure culture from human oral samples
AccessionPRJNA282954
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismhuman oral metagenome[Taxonomy ID: 447426]
unclassified sequences; metagenomes; organismal metagenomes; human oral metagenome
Publications (total 3)
  • Bor B et al., "Insights Obtained by Culturing Saccharibacteria With Their Bacterial Hosts.", J Dent Res, 2020 Jun;99(6):685-694
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Grants
  • "A Foundation for The Oral Microbiome and Metagenome" (Grant ID DE016937, National Institute of Dental and Craniofacial Research)
SubmissionRegistration date: 6-Apr-2018
The Forsyth Institute
Related Resources
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)176
WGS master10
Genomic DNA155
SRA Experiments4
Protein Sequences229822
Publications
PubMed3
PMC2
Other datasets
BioSample121
Assembly118
Supplementary data
Base modification101
Assembly details:
Assembly levelNumber of Assemblies
98
10
10
118
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_001553935.1Complete genomeSAMN04435864
T14V
GCA_001553565.1Complete genomeSAMN04435863
CCUG 36733
GCA_013394715.1Complete genomeSAMN15358582
F0496
GCA_005696555.1Complete genomeSAMN11483330
F0337
GCA_001278845.1Complete genomeSAMN04009745
F0588
GCA_002999235.1Complete genomeSAMN08439033
F0631
GCA_001262035.1Complete genomeSAMN03704034
W10433
GCA_018128305.1Complete genomeSAMN18352203
W11186
GCA_001717545.1Complete genomeSAMN05505093
W11661
GCA_005696855.1Complete genomeSAMN11483328
F0700
GCA_018128365.1Complete genomeSAMN18352198
F0714
GCA_018128345.1Complete genomeSAMN18352184
F0231
GCA_018128325.1Complete genomeSAMN18352173
DSMZ 100122
GCA_001189535.1Complete genomeSAMN03704031
F0371
GCA_018128285.1Complete genomeSAMN18352207
W9116
GCA_002998535.1Complete genomeSAMN08439035
F0111
GCA_002998435.1Complete genomeSAMN08472433
ATCC 33285
GCA_005697565.1Complete genomeSAMN11483331
BB001
GCA_005697215.1Complete genomeSAMN11483318
AC001
GCA_013100845.1Complete genomeSAMN11483319
AC002
GCA_013100825.1Complete genomeSAMN11483320
CM006
GCA_013100805.1Complete genomeSAMN11483321
FS03P
GCA_013099195.1Complete genomeSAMN11483322
CM001
GCA_013099015.1Complete genomeSAMN11483323
CM002
GCA_013098855.1Complete genomeSAMN11483324
CM003
GCA_013098655.1Complete genomeSAMN11483325
CM009
GCA_013098515.1Complete genomeSAMN11483326
CM010
GCA_010202845.1Complete genomeSAMN13876978
FS05P-B
GCA_010202645.1Complete genomeSAMN13876979
FS07P
GCA_010202465.1Complete genomeSAMN13876980
FS13P
GCA_010202115.1Complete genomeSAMN13876982
FS15P
GCA_013394755.1Complete genomeSAMN15358658
HB001
GCA_010202265.1Complete genomeSAMN13876981
FS14P
GCA_010201925.1Complete genomeSAMN13876983
FS17P
GCA_005697055.1Complete genomeSAMN11483327
PM004
GCA_001553545.1Complete genomeSAMN04435862
CCUG 32990
GCA_001278825.1Complete genomeSAMN04009744
F0383
GCA_002998835.1Complete genomeSAMN08439036
F0512
GCA_002999135.1Complete genomeSAMN08472925
F0545
GCA_013394735.1Complete genomeSAMN15360087
W10638
GCA_013394785.1ContigJABXYW000000000
SAMN15360088
W10654
GCA_018128265.1Complete genomeSAMN18352201
ORNL-0100
GCA_001717565.1Complete genomeSAMN05413927
F0672
GCA_001553625.1Complete genomeSAMN04435861
DSM 12838
GCA_001553605.1Complete genomeSAMN04435860
CCUG 45958
GCA_001717505.1Complete genomeSAMN05413926
F0677
GCA_002999155.1Complete genomeSAMN08439030
W5195
GCA_002998295.1Complete genomeSAMN08567288
CCUG 47711
GCA_002243405.1ChromosomeSAMN03897723
W7671
GCA_001553915.1Complete genomeSAMN04435857
W2231
GCA_002998595.1Complete genomeSAMN08439034
F0629
GCA_003043955.1ContigPYXF00000000
SAMN08743845
F0428
GCA_018141845.1ChromosomeSAMN18352199
F0428
GCA_002999035.1Complete genomeSAMN08439028
W11650
GCA_001274535.1Complete genomeSAMN03976113
W10393
GCA_018128225.1Complete genomeSAMN18352197
F0707
GCA_018128245.1Complete genomeSAMN18352196
F0705
GCA_013394795.1ContigJABXYU000000000
SAMN15358583
F0708
GCA_013394865.1ContigJABXYV000000000
SAMN15358621
F0703
GCA_002240055.1Complete genomeSAMN05413925
F0590
GCA_001553645.1Complete genomeSAMN04435855
F0260
GCA_002998925.1Complete genomeSAMN08567286
CCUG 47132
GCA_002243385.1ChromosomeSAMN03897725
ATCC 700696
GCA_013394805.1ContigJABXYR000000000
SAMN15357426
W9173
GCA_001553955.1Complete genomeSAMN04435858
CCUG 350
GCA_001189515.2Complete genomeSAMN03785053
F0089
GCA_013394775.1ContigJABXYT000000000
SAMN15358533
W9097
GCA_001262075.1Complete genomeSAMN03704033
W10237
GCA_003033945.1ChromosomeSAMN08743844
W10507
GCA_013394875.1ContigJABXYS000000000
SAMN15358171
W5028
GCA_002998695.1Complete genomeSAMN08439029
W2294
GCA_018127745.1Complete genomeSAMN18352206
W7780
GCA_018141825.1ChromosomeSAMN18352179
F0105
GCA_018128205.1Complete genomeSAMN18352182
F0115
GCA_018128185.1Complete genomeSAMN18352183
F0119
GCA_018128165.1Complete genomeSAMN18352185
F0288
GCA_001444445.1Complete genomeSAMN04260158
F0113
GCA_001262015.1Complete genomeSAMN03704035
W1435
GCA_018128145.1Complete genomeSAMN18352204
W1435
GCA_018128125.1Complete genomeSAMN18352190
F0411
GCA_018128105.1Complete genomeSAMN18352180
F0106
GCA_018128085.1Complete genomeSAMN18352195
F0697
GCA_018128065.1Complete genomeSAMN18352176
F0091
GCA_018128045.1Complete genomeSAMN18352174
F0054
GCA_018128005.1Complete genomeSAMN18352186
F0299
GCA_018127965.1Complete genomeSAMN18352188
F0301
GCA_018127945.1Complete genomeSAMN18352187
F0300
GCA_018127925.1Complete genomeSAMN18352191
F0516
GCA_018127905.1Complete genomeSAMN18352193
F0692
GCA_018127885.1Complete genomeSAMN18352194
F0695
GCA_018127985.1Complete genomeSAMN18352177
F0096
GCA_018127865.1Complete genomeSAMN18352178
F0103
GCA_018127845.1Complete genomeSAMN18352192
F0630
GCA_018127825.1Complete genomeSAMN18352181
F0109
GCA_001683355.1ChromosomeSAMN03897722
W2052
GCA_018127785.1Complete genomeSAMN18352205
W2052
GCA_003043935.1ContigPYXE00000000SAMN04435865
F0648
GCA_003043945.1ContigPYXG00000000
SAMN08743843
F0043
GCA_018127805.1Complete genomeSAMN18352175
F0059
GCA_003043925.1ContigPYXD00000000
SAMN08439031
W6195
GCA_018127765.1Complete genomeSAMN18352189
F0319
GCA_001262055.1Complete genomeSAMN03704036
W712
GCA_005696695.1Complete genomeSAMN11483329
XH001
GCA_001683335.1ChromosomeSAMN03897727
W7667
GCA_001554015.1Complete genomeSAMN04435856
F0591
GCA_001189555.1Complete genomeSAMN03704032
F0592
GCA_001717585.1Complete genomeSAMN05420587
W5150
GCA_018127725.1Complete genomeSAMN18352172
CCUG 66490
GCA_013394695.1Complete genomeSAMN15358107
F0704
GCA_001683375.1ChromosomeSAMN03897726
W10853
GCA_001553685.1Complete genomeSAMN04435859
F0610 (5-114)
GCA_018127705.1Complete genomeSAMN18352202
PM007
GCA_005697395.1Complete genomeSAMN11483332
TM7x
GCA_001717525.2Complete genomeSAMN05413928
W11667
GCA_003033925.1ChromosomeSAMN08743846
W11666
GCA_002998355.1Complete genomeSAMN08567287
CCUG 44730
GCA_003433295.1ChromosomeSAMN03897724
ATCC 700079
GCA_001189495.1Complete genomeSAMN03704030
ATCC 35585
SRA Data Details
ParameterValue
Data volume, Gbases6
Data volume, Mbytes21865

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