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Accession: PRJNA282648 ID: 282648

Drosophila melanogaster (fruit fly)

Evidence that DNA sequence templates adjacent nucleosome and ORC occupied sites at gene amplification origins in Drosophila

See Genome Information for Drosophila melanogaster
To gain insights into the molecular mechanisms by which epigenome influences orgins of DNA replication in Eukaryotes, we examined nucleosome position at the well-characterized replication origins responsible for developmental gene amplification in Drosophila ovary using MNase-Seq technique (Micrococcal nuclease digestion with paired-end Illumina sequencing). More...
AccessionPRJNA282648
Data TypeTargeted Locus (Loci)
ScopeMonoisolate
OrganismDrosophila melanogaster[Taxonomy ID: 7227]
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora; Drosophila melanogaster
PublicationsLiu J et al., "DNA sequence templates adjacent nucleosome and ORC sites at gene amplification origins in Drosophila.", Nucleic Acids Res, 2015 Oct 15;43(18):8746-61
SubmissionRegistration date: 29-Apr-2015
Indiana University
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
PMC1
Other datasets
BioSample6
SRA Data Details
ParameterValue
Data volume, Gbases23
Data volume, Mbytes15486

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