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1 additional project is a component of the Integrative genomics identifies novel associations with APOL1 risk genotype in African American NEPTUNE subjects.
Tubulointersitial expression data from human kidney biopsy in African American subjects with glomerulopathies
We used microarrays to analyze the transcriptome of African American subjects with glomerulopathies and the association of expression with APOL1 risk alleles (G1 and G2)
Overall design: RNA from tubulointerstitial compartment was extracted and processed for hybridization on Affymetrix microarrays.
| Accession | PRJNA282093; GEO: GSE68126 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens |
| Publications | Sampson MG et al., "Integrative Genomics Identifies Novel Associations with APOL1 Risk Genotypes in Black NEPTUNE Subjects.", J Am Soc Nephrol, 2016 Mar;27(3):814-23 |
| Submission | Registration date: 21-Apr-2015
Pediatrics, University of Michigan School of Medicine |
| Relevance | Medical |
Project Data:
| Resource Name | Number
of Links |
|---|
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| GEO DataSets | 1 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 1759450 |
| Data volume, Processed Mbytes | 36 |
| Data volume, Supplementary Mbytes | 237 |