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Accession: PRJNA282046 ID: 282046

Chikungunya virus strain:PR-S4, PR-S5, PR-S6 (Puerto Rico)

Chikungunya virus strain:PR-S4, PR-S5, PR-S6 (Puerto Rico) Metagenomic assembly

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This project is a component of the Viral pathogen detection and discovery by clinical metagenomics
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14 additional projects are components of the Viral pathogen detection and discovery by clinical metagenomics.
Here we employed a number of genomic-based assays to (1) detect CHIKV infection by real-time transcription-mediated amplification (TMA) testing in 3 asymptomatic donors (0. More...
AccessionPRJNA282046
Data TypeMetagenomic assembly
ScopeMultiisolate
OrganismChikungunya virus[Taxonomy ID: 37124]
Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus; Chikungunya virus
SubmissionRegistration date: 23-Apr-2015
University of California, San Francisco
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments1
Other datasets
BioSample1
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes714

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