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Accession: PRJNA282022 ID: 282022

Caenorhabditis elegans

Genome-wide RNA Pol II-CTD occupancy in wild type and mutant worms

See Genome Information for Caenorhabditis elegans
We used RNA Pol II-CTD occupancy assay to identify mRNA isoform switch in mutant animals compared to wild type animals. More...
AccessionPRJNA282022; GEO: GSE68203
Data TypeEpigenomics
ScopeMultiisolate
OrganismCaenorhabditis elegans[Taxonomy ID: 6239]
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans
PublicationsChen F et al., "Context-dependent modulation of Pol II CTD phosphatase SSUP-72 regulates alternative polyadenylation in neuronal development.", Genes Dev, 2015 Nov 15;29(22):2377-90
SubmissionRegistration date: 23-Apr-2015
George Palade Laboratories, CMM, UC San Diego
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments9
Publications
PubMed1
PMC1
Other datasets
BioSample9
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes768
SRA Data Details
ParameterValue
Data volume, Gbases8
Data volume, Mbytes5964

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