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Accession: PRJNA281932 ID: 281932

Mus musculus (house mouse)

Investigating GPR34 expression regulation using whole transcriptome sequencing of spleens and dendritic cells from wildtype and GPR34 knockout mice

See Genome Information for Mus musculus
Naive spleens as well as naive and LPS-treated dendritic cells from wildtype and GPR34-/- mice were sequenced to integrate expression profiles with protein interaction networks and find functional modules that are affected by GPR34 Overall design: Expression profiles of dendritic cells and whole spleens were generated using Illumina HiSeq 2500/ Illumina HiScan
AccessionPRJNA281932; GEO: GSE68155
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsJäger E et al., "Dendritic Cells Regulate GPR34 through Mitogenic Signals and Undergo Apoptosis in Its Absence.", J Immunol, 2016 Mar 15;196(6):2504-13
SubmissionRegistration date: 22-Apr-2015
Institute of Biochemistry, Medical Faculty, Leipzig University
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments31
Publications
PubMed1
Other datasets
BioSample31
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes13
SRA Data Details
ParameterValue
Data volume, Gbases58
Data volume, Mbytes43870

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