Vibrio (ID 281423) - BioProject

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Accession: PRJNA281423 ID: 281423

Vibrio

Vibrio cholerae and Vibrio meteocus comparative genomics

Vibrio cholerae and Vibrio meteocus

Accession	PRJNA281423
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Vibrio[Taxonomy ID: 662] Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
Publications	Orata FD et al., "The Dynamics of Genetic Interactions between Vibrio metoecus and Vibrio cholerae, Two Close Relatives Co-Occurring in the Environment.", Genome Biol Evol, 2015 Oct 9;7(10):2941-54
Submission	Registration date: 22-Oct-2015 University of Alberta
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	20300
WGS master	166
Protein Sequences	223149
Publications
PubMed	1
PMC	1
Other datasets
BioSample	166
Assembly	166

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

43
123
166

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_002284495.1	NMTO00000000	SAMN07350468	OYP1G01	Vibrio cholerae
GCA_002284455.1	NMTP00000000	SAMN07350467	OYP1E07	Vibrio cholerae
GCA_002284255.1	NMTF00000000	SAMN07350477	OYP4H08	Vibrio cholerae
GCA_002284475.1	NMTM00000000	SAMN07350470	OYP2C05	Vibrio cholerae
GCA_002284425.1	NMTL00000000	SAMN07350471	OYP2D07	Vibrio cholerae
GCA_002284415.1	NMTK00000000	SAMN07350472	OYP2E01	Vibrio cholerae
GCA_002284395.1	NMTN00000000	SAMN07350469	OYP2A12	Vibrio cholerae
GCA_002284365.1	NMTI00000000	SAMN07350474	OYP4B01	Vibrio cholerae
GCA_002284355.1	NMTJ00000000	SAMN07350473	OYP3F10	Vibrio cholerae
GCA_002284325.1	NMTH00000000	SAMN07350475	OYP4G08	Vibrio cholerae
GCA_002284315.1	NMTG00000000	SAMN07350476	OYP4H06	Vibrio cholerae
GCA_002284235.1	NMTD00000000	SAMN07350479	OYP5F10	Vibrio cholerae
GCA_002284205.1	NMTC00000000	SAMN07350480	OYP6D06	Vibrio cholerae
GCA_002284265.1	NMSZ00000000	SAMN07350483	OYP6F10	Vibrio cholerae
GCA_002284245.1	NMTE00000000	SAMN07350478	OYP4H11	Vibrio cholerae
GCA_002284185.1	NMTB00000000	SAMN07350481	OYP6E07	Vibrio cholerae
GCA_002284125.1	NMSW00000000	SAMN07350486	OYP8A01	Vibrio cholerae
GCA_002284175.1	NMTA00000000	SAMN07350482	OYP6F08	Vibrio cholerae
GCA_002284155.1	NMSY00000000	SAMN07350484	OYP6G08	Vibrio cholerae
GCA_002284115.1	NMSU00000000	SAMN07350488	OYP8F12	Vibrio cholerae
GCA_002284095.1	NMSV00000000	SAMN07350487	OYP8C06	Vibrio cholerae
GCA_002284075.1	NMSX00000000	SAMN07350485	OYP7C09	Vibrio cholerae
GCA_003349725.1	QECI00000000	SAMN08984058	OYP3E02	Vibrio cholerae
GCA_003349755.1	QECP00000000	SAMN08984051	OYP2A04	Vibrio cholerae
GCA_003349715.1	QECH00000000	SAMN08984059	OYP4A01	Vibrio cholerae
GCA_003349745.1	QECJ00000000	SAMN08984057	OYP3D09	Vibrio cholerae
GCA_003349685.1	QECF00000000	SAMN08984061	OYP4B08	Vibrio cholerae
GCA_003349665.1	QECC00000000	SAMN08984064	OYP4D10	Vibrio cholerae
GCA_003349625.1	QEBW00000000	SAMN08984070	OYP4H08	Vibrio cholerae
GCA_003349645.1	QEBY00000000	SAMN08984068	OYP4H04	Vibrio cholerae
GCA_003349575.1	QEBQ00000000	SAMN08984076	OYP5H09	Vibrio cholerae
GCA_003349615.1	QEBS00000000	SAMN08984074	OYP5F01	Vibrio cholerae
GCA_003349585.1	QEBU00000000	SAMN08984072	OYP5B09	Vibrio cholerae
GCA_003349545.1	QEBG00000000	SAMN08984086	OYP6F07	Vibrio cholerae
GCA_003349525.1	QEBO00000000	SAMN08984078	OYP6D03	Vibrio cholerae
GCA_003349495.1	QECQ00000000	SAMN08984050	OYP1E12	Vibrio cholerae
GCA_003349435.1	QECN00000000	SAMN08984053	OYP2B04	Vibrio cholerae
GCA_003349475.1	QECR00000000	SAMN08984049	OYP1C06	Vibrio cholerae
GCA_003349445.1	QECO00000000	SAMN08984052	OYP2A12	Vibrio cholerae
GCA_003349395.1	QECL00000000	SAMN08984055	OYP2E03	Vibrio cholerae
GCA_003349405.1	QECM00000000	SAMN08984054	OYP2C01	Vibrio cholerae
GCA_003349215.1	QEBX00000000	SAMN08984069	OYP4H07	Vibrio cholerae
GCA_003349315.1	QECE00000000	SAMN08984062	OYP4D04	Vibrio cholerae
GCA_003349365.1	QECK00000000	SAMN08984056	OYP2H11	Vibrio cholerae
GCA_003349335.1	QECG00000000	SAMN08984060	OYP4B01	Vibrio cholerae
GCA_003349325.1	QECD00000000	SAMN08984063	OYP4D09	Vibrio cholerae
GCA_003349275.1	QECB00000000	SAMN08984065	OYP4E08	Vibrio cholerae
GCA_003349245.1	QEBZ00000000	SAMN08984067	OYP4G07	Vibrio cholerae
GCA_003349265.1	QECA00000000	SAMN08984066	OYP4F04	Vibrio cholerae
GCA_003349195.1	QEBT00000000	SAMN08984073	OYP5B11	Vibrio cholerae
GCA_003349205.1	QEBV00000000	SAMN08984071	OYP4H10	Vibrio cholerae
GCA_003349155.1	QEBR00000000	SAMN08984075	OYP5F05	Vibrio cholerae
GCA_003349115.1	QEBM00000000	SAMN08984080	OYP6D09	Vibrio cholerae
GCA_003349145.1	QEBN00000000	SAMN08984079	OYP6D07	Vibrio cholerae
GCA_003349125.1	QEBP00000000	SAMN08984077	OYP6B02	Vibrio cholerae
GCA_003349065.1	QEBK00000000	SAMN08984082	OYP6E06	Vibrio cholerae
GCA_003349035.1	QEBI00000000	SAMN08984084	OYP6E10	Vibrio cholerae
GCA_003349055.1	QEBL00000000	SAMN08984081	OYP6E05	Vibrio cholerae
GCA_003349045.1	QEBJ00000000	SAMN08984083	OYP6E09	Vibrio cholerae
GCA_003348985.1	QEBF00000000	SAMN08984087	OYP6F09	Vibrio cholerae
GCA_003348995.1	QEBH00000000	SAMN08984085	OYP6F04	Vibrio cholerae
GCA_003348965.1	QEBE00000000	SAMN08984088	OYP6G01	Vibrio cholerae
GCA_003348955.1	QEBD00000000	SAMN08984089	OYP7B03	Vibrio cholerae
GCA_003348925.1	QEBC00000000	SAMN08984090	OYP7B05	Vibrio cholerae
GCA_003348885.1	QEBA00000000	SAMN08984092	OYP7C01	Vibrio cholerae
GCA_003348905.1	QEBB00000000	SAMN08984091	OYP7B07	Vibrio cholerae
GCA_003348875.1	QEAZ00000000	SAMN08984093	OYP7C09	Vibrio cholerae
GCA_003348835.1	QEAY00000000	SAMN08984094	OYP7F09	Vibrio cholerae
GCA_003348825.1	QEAW00000000	SAMN08984096	OYP8A02	Vibrio cholerae
GCA_003348795.1	QEAV00000000	SAMN08984097	OYP8B04	Vibrio cholerae
GCA_003348815.1	QEAX00000000	SAMN08984095	OYP7G04	Vibrio cholerae
GCA_003348755.1	QEAU00000000	SAMN08984098	OYP8E03	Vibrio cholerae
GCA_003348735.1	QEER00000000	SAMN08982477	BD01	Vibrio cholerae
GCA_003348745.1	QEAT00000000	SAMN08984099	OYP9F05	Vibrio cholerae
GCA_003348715.1	QECV00000000	SAMN08982481	BD06	Vibrio cholerae
GCA_003348675.1	QECU00000000	SAMN08982482	BD07	Vibrio cholerae
GCA_003348665.1	QEEJ00000000	SAMN08982489	BD15	Vibrio cholerae
GCA_003348655.1	QEEK00000000	SAMN08982488	BD14	Vibrio cholerae
GCA_003348635.1	QEDS00000000	SAMN08982506	BD33	Vibrio cholerae
GCA_003348595.1	QEEF00000000	SAMN08982493	BD20	Vibrio cholerae
GCA_003348575.1	QEDO00000000	SAMN08982510	BD38	Vibrio cholerae
GCA_003348585.1	QEDQ00000000	SAMN08982508	BD35	Vibrio cholerae
GCA_003348535.1	QEDG00000000	SAMN08982518	BD49	Vibrio cholerae
GCA_003348415.1	QEEN00000000	SAMN08982485	BD11	Vibrio cholerae
GCA_003348545.1	QEDN00000000	SAMN08982511	BD39	Vibrio cholerae
GCA_003348515.1	QEEQ00000000	SAMN08982478	BD03	Vibrio cholerae
GCA_003348465.1	QEEO00000000	SAMN08982480	BD05	Vibrio cholerae
GCA_003348485.1	QEEP00000000	SAMN08982479	BD04	Vibrio cholerae
GCA_003348445.1	QECT00000000	SAMN08982483	BD08	Vibrio cholerae
GCA_003348405.1	QECS00000000	SAMN08982484	BD10	Vibrio cholerae
GCA_003348395.1	QEEL00000000	SAMN08982487	BD13	Vibrio cholerae
GCA_003348365.1	QEEH00000000	SAMN08982491	BD18	Vibrio cholerae
GCA_003348355.1	QEEM00000000	SAMN08982486	BD12	Vibrio cholerae
GCA_003348335.1	QEEG00000000	SAMN08982492	BD19	Vibrio cholerae
GCA_003348305.1	QEEI00000000	SAMN08982490	BD17	Vibrio cholerae
GCA_003348295.1	QEED00000000	SAMN08982495	BD22	Vibrio cholerae
GCA_003348265.1	QEEA00000000	SAMN08982498	BD25	Vibrio cholerae
GCA_003348245.1	QEEE00000000	SAMN08982494	BD21	Vibrio cholerae
GCA_003348235.1	QEDZ00000000	SAMN08982499	BD26	Vibrio cholerae
GCA_003348215.1	QEEC00000000	SAMN08982496	BD23	Vibrio cholerae
GCA_003348195.1	QEEB00000000	SAMN08982497	BD24	Vibrio cholerae
GCA_003348175.1	QEDY00000000	SAMN08982500	BD27	Vibrio cholerae
GCA_003347895.1	QEDF00000000	SAMN08982519	BD50	Vibrio cholerae
GCA_003348145.1	QEDX00000000	SAMN08982501	BD28	Vibrio cholerae
GCA_003348135.1	QEDW00000000	SAMN08982502	BD29	Vibrio cholerae
GCA_003348115.1	QEDV00000000	SAMN08982503	BD30	Vibrio cholerae
GCA_003348065.1	QEDT00000000	SAMN08982505	BD32	Vibrio cholerae
GCA_003348095.1	QEDU00000000	SAMN08982504	BD31	Vibrio cholerae
GCA_003348055.1	QEDR00000000	SAMN08982507	BD34	Vibrio cholerae
GCA_003348035.1	QEDP00000000	SAMN08982509	BD37	Vibrio cholerae
GCA_003347915.1	QEDJ00000000	SAMN08982515	BD46	Vibrio cholerae
GCA_003348015.1	QEDM00000000	SAMN08982512	BD40	Vibrio cholerae
GCA_003347995.1	QEDL00000000	SAMN08982513	BD43	Vibrio cholerae
GCA_003347945.1	QEDK00000000	SAMN08982514	BD44	Vibrio cholerae
GCA_003347935.1	QEDH00000000	SAMN08982517	BD48	Vibrio cholerae
GCA_003347905.1	QEDI00000000	SAMN08982516	BD47	Vibrio cholerae
GCA_003347855.1	QEDD00000000	SAMN08982521	BD53	Vibrio cholerae
GCA_003347865.1	QEDE00000000	SAMN08982520	BD51	Vibrio cholerae
GCA_003347835.1	QEDC00000000	SAMN08982522	BD54	Vibrio cholerae
GCA_003347815.1	QEDA00000000	SAMN08982524	BD56	Vibrio cholerae
GCA_003347785.1	QECX00000000	SAMN08982527	BD59	Vibrio cholerae
GCA_003347775.1	QEDB00000000	SAMN08982523	BD55	Vibrio cholerae
GCA_003347755.1	QECZ00000000	SAMN08982525	BD57	Vibrio cholerae
GCA_003347725.1	QECY00000000	SAMN08982526	BD58	Vibrio cholerae
GCA_003347715.1	QECW00000000	SAMN08982528	BD60	Vibrio cholerae
GCA_001402655.1	LBGN00000000	SAMN03488023	YB8E08	Vibrio cholerae
GCA_001402595.1	LBGM00000000	SAMN03488022	YB7A09	Vibrio cholerae
GCA_001402585.1	LBGI00000000	SAMN03488018	YB4H02	Vibrio cholerae
GCA_001402575.1	LBGG00000000	SAMN03488016	YB4G05	Vibrio cholerae
GCA_001402185.1	LBCL00000000	SAMN03488004	YB1A01	Vibrio cholerae
GCA_001402375.1	LBFX00000000	SAMN03488007	YB2A06	Vibrio cholerae
GCA_001402365.1	LBFV00000000	SAMN03488005	YB1G06	Vibrio cholerae
GCA_001402335.1	LBGL00000000	SAMN03488021	YB7A06	Vibrio cholerae
GCA_001402275.1	LBGC00000000	SAMN03488012	YB3G04	Vibrio cholerae
GCA_001402285.1	LBGE00000000	SAMN03488014	YB4C07	Vibrio cholerae
GCA_001402265.1	LBGF00000000	SAMN03488015	YB4F05	Vibrio cholerae
GCA_001402255.1	LBGH00000000	SAMN03488017	YB4G06	Vibrio cholerae
GCA_001402605.1	LBGD00000000	SAMN03488013	YB4B03	Vibrio cholerae
GCA_001402545.1	LBGB00000000	SAMN03488011	YB3B05	Vibrio cholerae
GCA_001402535.1	LBFW00000000	SAMN03488006	YB2A05	Vibrio cholerae
GCA_001402445.1	LBGK00000000	SAMN03488020	YB6A06	Vibrio cholerae
GCA_001402435.1	LBGJ00000000	SAMN03488019	YB5A06	Vibrio cholerae
GCA_001402425.1	LBGA00000000	SAMN03488010	YB2G07	Vibrio cholerae
GCA_001402415.1	LBFZ00000000	SAMN03488009	YB2G05	Vibrio cholerae
GCA_001411585.1	LBFY00000000	SAMN03488008	YB2G01	Vibrio cholerae
GCA_001402345.1	LBGQ00000000	SAMN03488026	YB5B06	Vibrio metoecus
GCA_001402515.1	LBGR00000000	SAMN03488027	YB9D03	Vibrio metoecus
GCA_001402175.1	LCUF00000000	SAMN03610460	08-2459	Vibrio metoecus
GCA_001402495.1	LBGO00000000	SAMN03488024	YB4D01	Vibrio metoecus
GCA_001402685.1	LCUG00000000	SAMN03610461	2010V-1005	Vibrio metoecus
GCA_001402675.1	LBGP00000000	SAMN03488025	YB5B04	Vibrio metoecus
GCA_001402165.1	LCUE00000000	SAMN03610459	07-2435	Vibrio metoecus
GCA_001402155.1	LCUD00000000	SAMN03610458	06-2478	Vibrio metoecus
GCA_002283995.1	NMSS00000000	SAMN07350490	OYP5D09	Vibrio metoecus
GCA_002284045.1	NMSP00000000	SAMN07350493	OYP8G09	Vibrio metoecus
GCA_002284025.1	NMSO00000000	SAMN07350494	OYP8G12	Vibrio metoecus
GCA_002284005.1	NMST00000000	SAMN07350489	OYP4E03	Vibrio metoecus
GCA_002283955.1	NMSQ00000000	SAMN07350492	OYP8G05	Vibrio metoecus
GCA_002283915.1	NMSN00000000	SAMN07350495	OYP8H05	Vibrio metoecus
GCA_002283965.1	NMSR00000000	SAMN07350491	OYP5H08	Vibrio metoecus
GCA_002283905.1	NMSM00000000	SAMN07350496	OYP9B03	Vibrio metoecus
GCA_002283855.1	NMSH00000000	SAMN07350501	OYP9E10	Vibrio metoecus
GCA_002283895.1	NMSI00000000	SAMN07350500	OYP9E03	Vibrio metoecus
GCA_002283845.1	NMSL00000000	SAMN07350497	OYP9B09	Vibrio metoecus
GCA_002283835.1	NMSK00000000	SAMN07350498	OYP9C12	Vibrio metoecus
GCA_002283805.1	NMSJ00000000	SAMN07350499	OYP9D09	Vibrio metoecus

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Vibrio cholerae and Vibrio meteocus comparative genomics

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