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Accession: PRJNA281423 ID: 281423

Vibrio

Vibrio cholerae and Vibrio meteocus comparative genomics

Vibrio cholerae and Vibrio meteocus
AccessionPRJNA281423
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismVibrio[Taxonomy ID: 662]
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
PublicationsOrata FD et al., "The Dynamics of Genetic Interactions between Vibrio metoecus and Vibrio cholerae, Two Close Relatives Co-Occurring in the Environment.", Genome Biol Evol, 2015 Oct 9;7(10):2941-54
SubmissionRegistration date: 22-Oct-2015
University of Alberta
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)20300
WGS master166
Protein Sequences223149
Publications
PubMed1
PMC1
Other datasets
BioSample166
Assembly166
Assembly details:
Assembly levelNumber of Assemblies
43
123
166
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_003349725.1ContigQECI00000000SAMN08984058
OYP3E02
GCA_003349755.1ContigQECP00000000SAMN08984051
OYP2A04
GCA_003349715.1ContigQECH00000000SAMN08984059
OYP4A01
GCA_003349745.1ContigQECJ00000000SAMN08984057
OYP3D09
GCA_003349685.1ContigQECF00000000SAMN08984061
OYP4B08
GCA_003349665.1ContigQECC00000000SAMN08984064
OYP4D10
GCA_003349625.1ContigQEBW00000000SAMN08984070
OYP4H08
GCA_003349645.1ContigQEBY00000000SAMN08984068
OYP4H04
GCA_003349575.1ContigQEBQ00000000SAMN08984076
OYP5H09
GCA_003349615.1ContigQEBS00000000SAMN08984074
OYP5F01
GCA_003349585.1ContigQEBU00000000SAMN08984072
OYP5B09
GCA_003349545.1ContigQEBG00000000SAMN08984086
OYP6F07
GCA_003349525.1ContigQEBO00000000SAMN08984078
OYP6D03
GCA_003349495.1ContigQECQ00000000SAMN08984050
OYP1E12
GCA_003349435.1ContigQECN00000000SAMN08984053
OYP2B04
GCA_003349475.1ContigQECR00000000SAMN08984049
OYP1C06
GCA_003349445.1ContigQECO00000000SAMN08984052
OYP2A12
GCA_003349395.1ContigQECL00000000SAMN08984055
OYP2E03
GCA_003349405.1ContigQECM00000000SAMN08984054
OYP2C01
GCA_003349215.1ContigQEBX00000000SAMN08984069
OYP4H07
GCA_003349315.1ContigQECE00000000SAMN08984062
OYP4D04
GCA_003349365.1ContigQECK00000000SAMN08984056
OYP2H11
GCA_003349335.1ContigQECG00000000SAMN08984060
OYP4B01
GCA_003349325.1ContigQECD00000000SAMN08984063
OYP4D09
GCA_003349275.1ContigQECB00000000SAMN08984065
OYP4E08
GCA_003349245.1ContigQEBZ00000000SAMN08984067
OYP4G07
GCA_003349265.1ContigQECA00000000SAMN08984066
OYP4F04
GCA_003349195.1ContigQEBT00000000SAMN08984073
OYP5B11
GCA_003349205.1ContigQEBV00000000SAMN08984071
OYP4H10
GCA_003349155.1ContigQEBR00000000SAMN08984075
OYP5F05
GCA_003349115.1ContigQEBM00000000SAMN08984080
OYP6D09
GCA_003349145.1ContigQEBN00000000SAMN08984079
OYP6D07
GCA_003349125.1ContigQEBP00000000SAMN08984077
OYP6B02
GCA_003349065.1ContigQEBK00000000SAMN08984082
OYP6E06
GCA_003349035.1ContigQEBI00000000SAMN08984084
OYP6E10
GCA_003349055.1ContigQEBL00000000SAMN08984081
OYP6E05
GCA_003349045.1ContigQEBJ00000000SAMN08984083
OYP6E09
GCA_003348985.1ContigQEBF00000000SAMN08984087
OYP6F09
GCA_003348995.1ContigQEBH00000000SAMN08984085
OYP6F04
GCA_003348965.1ContigQEBE00000000SAMN08984088
OYP6G01
GCA_003348955.1ContigQEBD00000000SAMN08984089
OYP7B03
GCA_003348925.1ContigQEBC00000000SAMN08984090
OYP7B05
GCA_003348885.1ContigQEBA00000000SAMN08984092
OYP7C01
GCA_003348905.1ContigQEBB00000000SAMN08984091
OYP7B07
GCA_003348875.1ContigQEAZ00000000SAMN08984093
OYP7C09
GCA_003348835.1ContigQEAY00000000SAMN08984094
OYP7F09
GCA_003348825.1ContigQEAW00000000SAMN08984096
OYP8A02
GCA_003348795.1ContigQEAV00000000SAMN08984097
OYP8B04
GCA_003348815.1ContigQEAX00000000SAMN08984095
OYP7G04
GCA_003348755.1ContigQEAU00000000SAMN08984098
OYP8E03
GCA_003348735.1ContigQEER00000000SAMN08982477
BD01
GCA_003348745.1ContigQEAT00000000SAMN08984099
OYP9F05
GCA_003348715.1ContigQECV00000000SAMN08982481
BD06
GCA_003348675.1ContigQECU00000000SAMN08982482
BD07
GCA_003348665.1ContigQEEJ00000000SAMN08982489
BD15
GCA_003348655.1ContigQEEK00000000SAMN08982488
BD14
GCA_003348635.1ContigQEDS00000000SAMN08982506
BD33
GCA_003348595.1ContigQEEF00000000SAMN08982493
BD20
GCA_003348575.1ContigQEDO00000000SAMN08982510
BD38
GCA_003348585.1ContigQEDQ00000000SAMN08982508
BD35
GCA_003348535.1ContigQEDG00000000SAMN08982518
BD49
GCA_003348415.1ContigQEEN00000000SAMN08982485
BD11
GCA_003348545.1ContigQEDN00000000SAMN08982511
BD39
GCA_003348515.1ContigQEEQ00000000SAMN08982478
BD03
GCA_003348465.1ContigQEEO00000000SAMN08982480
BD05
GCA_003348485.1ContigQEEP00000000SAMN08982479
BD04
GCA_003348445.1ContigQECT00000000SAMN08982483
BD08
GCA_003348405.1ContigQECS00000000SAMN08982484
BD10
GCA_003348395.1ContigQEEL00000000SAMN08982487
BD13
GCA_003348365.1ContigQEEH00000000SAMN08982491
BD18
GCA_003348355.1ContigQEEM00000000SAMN08982486
BD12
GCA_003348335.1ContigQEEG00000000SAMN08982492
BD19
GCA_003348305.1ContigQEEI00000000SAMN08982490
BD17
GCA_003348295.1ContigQEED00000000SAMN08982495
BD22
GCA_003348265.1ContigQEEA00000000SAMN08982498
BD25
GCA_003348245.1ContigQEEE00000000SAMN08982494
BD21
GCA_003348235.1ContigQEDZ00000000SAMN08982499
BD26
GCA_003348215.1ContigQEEC00000000SAMN08982496
BD23
GCA_003348195.1ContigQEEB00000000SAMN08982497
BD24
GCA_003348175.1ContigQEDY00000000SAMN08982500
BD27
GCA_003347895.1ContigQEDF00000000SAMN08982519
BD50
GCA_003348145.1ContigQEDX00000000SAMN08982501
BD28
GCA_003348135.1ContigQEDW00000000SAMN08982502
BD29
GCA_003348115.1ContigQEDV00000000SAMN08982503
BD30
GCA_003348065.1ContigQEDT00000000SAMN08982505
BD32
GCA_003348095.1ContigQEDU00000000SAMN08982504
BD31
GCA_003348055.1ContigQEDR00000000SAMN08982507
BD34
GCA_003348035.1ContigQEDP00000000SAMN08982509
BD37
GCA_003347915.1ContigQEDJ00000000SAMN08982515
BD46
GCA_003348015.1ContigQEDM00000000SAMN08982512
BD40
GCA_003347995.1ContigQEDL00000000SAMN08982513
BD43
GCA_003347945.1ContigQEDK00000000SAMN08982514
BD44
GCA_003347935.1ContigQEDH00000000SAMN08982517
BD48
GCA_003347905.1ContigQEDI00000000SAMN08982516
BD47
GCA_003347855.1ContigQEDD00000000SAMN08982521
BD53
GCA_003347865.1ContigQEDE00000000SAMN08982520
BD51
GCA_003347835.1ContigQEDC00000000SAMN08982522
BD54
GCA_003347815.1ContigQEDA00000000SAMN08982524
BD56
GCA_003347785.1ContigQECX00000000SAMN08982527
BD59
GCA_003347775.1ContigQEDB00000000SAMN08982523
BD55
GCA_003347755.1ContigQECZ00000000SAMN08982525
BD57
GCA_003347725.1ContigQECY00000000SAMN08982526
BD58
GCA_003347715.1ContigQECW00000000SAMN08982528
BD60
GCA_002284495.1ScaffoldNMTO00000000SAMN07350468
OYP1G01
GCA_002284455.1ScaffoldNMTP00000000SAMN07350467
OYP1E07
GCA_002284255.1ScaffoldNMTF00000000SAMN07350477
OYP4H08
GCA_002284475.1ScaffoldNMTM00000000SAMN07350470
OYP2C05
GCA_002284425.1ScaffoldNMTL00000000SAMN07350471
OYP2D07
GCA_002284415.1ScaffoldNMTK00000000SAMN07350472
OYP2E01
GCA_002284395.1ScaffoldNMTN00000000SAMN07350469
OYP2A12
GCA_002284365.1ScaffoldNMTI00000000SAMN07350474
OYP4B01
GCA_002284355.1ContigNMTJ00000000SAMN07350473
OYP3F10
GCA_002284325.1ScaffoldNMTH00000000SAMN07350475
OYP4G08
GCA_002284315.1ScaffoldNMTG00000000SAMN07350476
OYP4H06
GCA_002284235.1ContigNMTD00000000SAMN07350479
OYP5F10
GCA_002284205.1ScaffoldNMTC00000000SAMN07350480
OYP6D06
GCA_002284265.1ScaffoldNMSZ00000000SAMN07350483
OYP6F10
GCA_002284245.1ScaffoldNMTE00000000SAMN07350478
OYP4H11
GCA_002284185.1ScaffoldNMTB00000000SAMN07350481
OYP6E07
GCA_002284125.1ScaffoldNMSW00000000SAMN07350486
OYP8A01
GCA_002284175.1ScaffoldNMTA00000000SAMN07350482
OYP6F08
GCA_002284155.1ContigNMSY00000000SAMN07350484
OYP6G08
GCA_002284115.1ScaffoldNMSU00000000SAMN07350488
OYP8F12
GCA_002284095.1ContigNMSV00000000SAMN07350487
OYP8C06
GCA_002284075.1ContigNMSX00000000SAMN07350485
OYP7C09
GCA_001402185.1ContigLBCL00000000SAMN03488004
YB1A01
GCA_001402445.1ContigLBGK00000000SAMN03488020
YB6A06
GCA_001402435.1ScaffoldLBGJ00000000SAMN03488019
YB5A06
GCA_001402425.1ScaffoldLBGA00000000SAMN03488010
YB2G07
GCA_001402415.1ScaffoldLBFZ00000000SAMN03488009
YB2G05
GCA_001402375.1ContigLBFX00000000SAMN03488007
YB2A06
GCA_001402365.1ScaffoldLBFV00000000SAMN03488005
YB1G06
GCA_001402335.1ScaffoldLBGL00000000SAMN03488021
YB7A06
GCA_001402275.1ScaffoldLBGC00000000SAMN03488012
YB3G04
GCA_001402285.1ContigLBGE00000000SAMN03488014
YB4C07
GCA_001402265.1ScaffoldLBGF00000000SAMN03488015
YB4F05
GCA_001402255.1ScaffoldLBGH00000000SAMN03488017
YB4G06
GCA_001402605.1ContigLBGD00000000SAMN03488013
YB4B03
GCA_001402545.1ScaffoldLBGB00000000SAMN03488011
YB3B05
GCA_001402535.1ScaffoldLBFW00000000SAMN03488006
YB2A05
GCA_001402655.1ScaffoldLBGN00000000SAMN03488023
YB8E08
GCA_001402595.1ScaffoldLBGM00000000SAMN03488022
YB7A09
GCA_001402585.1ScaffoldLBGI00000000SAMN03488018
YB4H02
GCA_001402575.1ScaffoldLBGG00000000SAMN03488016
YB4G05
GCA_001411585.1ContigLBFY00000000SAMN03488008
YB2G01
GCA_001402515.1ScaffoldLBGR00000000SAMN03488027
YB9D03
GCA_001402345.1ScaffoldLBGQ00000000SAMN03488026
YB5B06
GCA_001402175.1ContigLCUF00000000SAMN03610460
08-2459
GCA_001402165.1ContigLCUE00000000SAMN03610459
07-2435
GCA_001402155.1ContigLCUD00000000SAMN03610458
06-2478
GCA_001402685.1ContigLCUG00000000SAMN03610461
2010V-1005
GCA_001402675.1ScaffoldLBGP00000000SAMN03488025
YB5B04
GCA_001402495.1ContigLBGO00000000SAMN03488024
YB4D01
GCA_002283995.1ScaffoldNMSS00000000SAMN07350490
OYP5D09
GCA_002284045.1ScaffoldNMSP00000000SAMN07350493
OYP8G09
GCA_002284025.1ScaffoldNMSO00000000SAMN07350494
OYP8G12
GCA_002284005.1ContigNMST00000000SAMN07350489
OYP4E03
GCA_002283955.1ContigNMSQ00000000SAMN07350492
OYP8G05
GCA_002283915.1ContigNMSN00000000SAMN07350495
OYP8H05
GCA_002283965.1ScaffoldNMSR00000000SAMN07350491
OYP5H08
GCA_002283905.1ContigNMSM00000000SAMN07350496
OYP9B03
GCA_002283855.1ScaffoldNMSH00000000SAMN07350501
OYP9E10
GCA_002283895.1ScaffoldNMSI00000000SAMN07350500
OYP9E03
GCA_002283845.1ScaffoldNMSL00000000SAMN07350497
OYP9B09
GCA_002283835.1ScaffoldNMSK00000000SAMN07350498
OYP9C12
GCA_002283805.1ScaffoldNMSJ00000000SAMN07350499
OYP9D09

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