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Accession: PRJNA281120 ID: 281120

Sus scrofa (pig)

Expression data from Bama minipig hearts - high-fat, high-sucrose diet

See Genome Information for Sus scrofa
In order to study the heart disorder that the long term, high energy diet caused, Bama miniature pigs were fed a high-fat, high-sucrose diet for 23 months. These pigs developed symptoms of metabolic syndrome and showed cardiac steatosis and hypertrophy with a greatly increased heart weight (1.82-fold, P<0.05) and heart volume (1.60-fold, P<0.05) compared with the control pigs. To understand the molecular mechanisms of cardiac steatosis and hypertrophy, nine pig heart cRNA samples were hybridized to porcine GeneChips. Overall design: The control group consisted of 6 Bama pigs fed a control diet, and the HFHSD group comprised 6 pigs that were induced with a HFHS diet, which included 37% sucrose, 53% control diet and 10% pork lard. The pigs were fed twice every day and provided water ad libitum for 23 months. The pigs were fasted for 12 hours and euthanized with ketamine and xylazine. Pig hearts from the HFHSD group pigs (120, 126, 138, 140, 144, and 146) and three control group pigs (157, 159, and 161) were sampled and preserved in liquid nitrogen and then for RNA extraction and hybridization on Affymetrix microarrays.
AccessionPRJNA281120; GEO: GSE67890
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismSus scrofa[Taxonomy ID: 9823]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus; Sus scrofa
Publications
  • Xia J et al., "Global Transcriptomic Profiling of Cardiac Hypertrophy and Fatty Heart Induced by Long-Term High-Energy Diet in Bama Miniature Pigs.", PLoS One, 2015;10(7):e0132420
  • Xia J et al., "Transcriptome analysis on the inflammatory cell infiltration of nonalcoholic steatohepatitis in bama minipigs induced by a long-term high-fat, high-sucrose diet.", PLoS One, 2014;9(11):e113724
SubmissionRegistration date: 14-Apr-2015
Chinese academy of agrigultural sciences
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Publications
PubMed2
PMC2
Other datasets
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots217107
Data volume, Processed Mbytes8
Data volume, Supplementary Mbytes28

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