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Accession: PRJNA281083 ID: 281083

Mus musculus (house mouse)

Detection of chromatin accessibility in WT and SRC-2-/- mice in liver

See Genome Information for Mus musculus
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This project is a component of the Coactivator-Dependent Oscillation of Chromatin Accessibility Dictates Circadian Gene Amplitude through REV-ERB Loading
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2 additional projects are components of the Coactivator-Dependent Oscillation of Chromatin Accessibility Dictates Circadian Gene Amplitude through REV-ERB Loading.
47588 additional projects are related by organism.
We futher characterized genome-wide chromatin accessibility of WT and SRC-2-/- mouse liver at CT10 through DNase-Seq. More...
AccessionPRJNA281083; GEO: GSE67859
Data TypeEpigenomics
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
Publications
  • Dasgupta S et al., "Metabolic enzyme PFKFB4 activates transcriptional coactivator SRC-3 to drive breast cancer.", Nature, 2018 Apr;556(7700):249-254
  • Zhu B et al., "Coactivator-Dependent Oscillation of Chromatin Accessibility Dictates Circadian Gene Amplitude via REV-ERB Loading.", Mol Cell, 2015 Dec 3;60(5):769-783
SubmissionRegistration date: 14-Apr-2015
Post-doc, MCB, Baylor College of Medicine
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments4
Publications
PubMed2
PMC2
Other datasets
BioSample4
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes330
SRA Data Details
ParameterValue
Data volume, Gbases12
Data volume, Mbytes4064

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