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Accession: PRJNA281080 ID: 281080

Coactivator-Dependent Oscillation of Chromatin Accessibility Dictates Circadian Gene Amplitude through REV-ERB Loading

This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series
AccessionPRJNA281080; GEO: GSE67860
TypeUmbrella project
Publications
  • Dasgupta S et al., "Metabolic enzyme PFKFB4 activates transcriptional coactivator SRC-3 to drive breast cancer.", Nature, 2018 Apr;556(7700):249-254
  • Zhu B et al., "Coactivator-Dependent Oscillation of Chromatin Accessibility Dictates Circadian Gene Amplitude via REV-ERB Loading.", Mol Cell, 2015 Dec 3;60(5):769-783
SubmissionRegistration date: 14-Apr-2015
Post-doc, MCB, Baylor College of Medicine
RelevanceSuperseries
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Publications
PubMed2
PMC2
Other datasets
BioSample12
GEO DataSets4
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1420
SRA Data Details
ParameterValue
Data volume, Gbases28
Data volume, Mbytes13812
Coactivator-Dependent Oscillation of Chromatin Accessibility Dictates Circadian Gene Amplitude through REV-ERB Loading encompasses the following 3 sub-projects:
Project TypeNumber of Projects
Epigenomics3
BioProject
accession
OrganismTitle
PRJNA281083Mus musculusDetection of chromatin accessibility in WT and SRC-2-/- mice in liver (Post-doc, MCB, Baylor College...)
PRJNA281076Mus musculusGenome-wide maps of BAF180 and REV-ERBα binding (Post-doc, MCB, Baylor College...)
PRJNA433839Mus musculusGenome-wide mapping of SRC-3 binding in the liver at CT4. (Post-doc, MCB, Baylor College...)

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