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Accession: PRJNA280420 ID: 280420

Escherichia coli str. K-12 substr. MG1655

MS2-affinity purification coupled with RNA sequencing (MAPS) reveals DsrA sRNA targetome

See Genome Information for Escherichia coli
DsrA regulatory RNA represses both hns and rbsD mRNAs through distinct mechanisms in Escherichia coli Overall design: Identification of RNAs co-purified with MS2-DsrA in a rne131 ΔdsrA strain. DsrA (without MS2) was used as control
AccessionPRJNA280420; GEO: GSE67605
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismEscherichia coli str. K-12 substr. MG1655[Taxonomy ID: 511145]
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli str. K-12 substr. MG1655
PublicationsLalaouna D et al., "DsrA regulatory RNA represses both hns and rbsD mRNAs through distinct mechanisms in Escherichia coli.", Mol Microbiol, 2015 Oct;98(2):357-69
SubmissionRegistration date: 6-Apr-2015
Eric Massé Laboratory, Biochemistry, University of Sherbrooke
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments2
Publications
PubMed1
Other datasets
BioSample2
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes700

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