This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA280332; GEO: GSE67584 |
| Type | Umbrella project |
| Publications | Chen PB et al., "R loops regulate promoter-proximal chromatin architecture and cellular differentiation.", Nat Struct Mol Biol, 2015 Dec;22(12):999-1007 |
| Submission | Registration date: 3-Apr-2015
Ghadiri, Chemistry, The Scripps Research Institute |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 39 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 39 |
| GEO DataSets | 5 |
R loops regulate promoter-proximal chromatin architecture and cellular differentiation encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA280330 | Mus musculus | Promoter-proximal R-loops regulate binding of chromatin regulators and pluripotency [DRIP-RNAseq] (Ghadiri, Chemistry, The Scripps...) | | PRJNA280290 | Mus musculus | Promoter-proximal R-loops regulate binding of chromatin regulators and pluripotency [ChIP-seq] (Ghadiri, Chemistry, The Scripps...) |
|
| Transcriptome or Gene expression | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA280333 | Mus musculus | Promoter-proximal R-loops regulate binding of chromatin regulators and pluripotency [RNA-seq] (Ghadiri, Chemistry, The Scripps...) | | PRJNA280334 | Mus musculus | Promoter-proximal R-loops regulate binding of chromatin regulators and pluripotency [RIP-seq] (Ghadiri, Chemistry, The Scripps...) |
|