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Accession: PRJNA280048 ID: 280048

Synchytrium endobioticum strain:18(T1)

Synchytrium endobioticum strain:18(T1) Genome sequencing and assembly

See Genome Information for Synchytrium endobioticum
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8 additional projects are related by organism.
There are over 40 Synchytrium endobioticum pathotypes described so far. Identification of those pathotypes have been using laborious inoculation assays of differential potato cultivars. More...
AccessionPRJNA280048
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismSynchytrium endobioticum[Taxonomy ID: 286115]
Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota; Chytridiomycota incertae sedis; Chytridiomycetes; Synchytriales; Synchytriaceae; Synchytrium; Synchytrium endobioticum
PublicationsBusse F et al., "Genomic and Transcriptomic Resources for Marker Development in Synchytrium endobioticum, an Elusive but Severe Potato Pathogen.", Phytopathology, 2017 Mar;107(3):322-328
Grants
  • "Entwicklung einer molekularen Diagnostik für die nachhaltige und Ressourcen-schonende Produktion des nachwachsenden Rohstoffs Kartoffelstärke" (Grant ID 22036311, Bundesministeriums für Ernährung und Landwirtschaft / Fachagentur Nachwachsende Rohstoffe e.V.)
SubmissionRegistration date: 19-Oct-2015
DiRK
- Leibniz Universitaet Hannover
RelevanceAgricultural
Locus Tag PrefixWQ61
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)1
SRA Experiments1
Publications
PubMed1
Other datasets
BioSample1
Assembly1
Assembly details:
SRA Data Details
ParameterValue
Data volume, Mbases33
Data volume, Mbytes21

Supplemental Content

Related information

LinkOut to external resources

  • GOLD: Gp0235845 [Genomes On Line Database]
    GOLD: Gp0235845
    Genomes On Line Database

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