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Accession: PRJNA279965 ID: 279965

Phaeodactylum tricornutum

Next generation sequencing for understading the role of nitrate reductase in remodeling intermediate metabolism in Phaeodactylum tricornutum

See Genome Information for Phaeodactylum tricornutum
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56 additional projects are related by organism.
We have done next generation sequencing of optically thin, exponentialy growing WT Phaeodactylum tricornutum and our ~50% nitrate reductase knock-down cultures. More...
AccessionPRJNA279965; GEO: GSE67449
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismPhaeodactylum tricornutum[Taxonomy ID: 2850]
Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum; Phaeodactylum tricornutum
PublicationsLevitan O et al., "An RNA interference knock-down of nitrate reductase enhances lipid biosynthesis in the diatom Phaeodactylum tricornutum.", Plant J, 2015 Dec;84(5):963-73
SubmissionRegistration date: 31-Mar-2015
Rutgers university
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Publications
PubMed1
Other datasets
BioSample12
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases4
Data volume, Mbytes2265

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