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Accession: PRJDB3230 ID: 279570

Ipomoea trifida

Whole-genome sequencing of Ipomoea trifida

See Genome Information for Ipomoea trifida
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9 additional projects are related by organism.
Draft genome sequence data of two lines of Ipomoea trifida were built with Illumina whole-genome shotgun sequencing technology.
AccessionPRJDB3230
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismIpomoea trifida[Taxonomy ID: 35884]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea; Ipomoea trifida
Publications
  • Hirakawa H et al., "Survey of genome sequences in a wild sweet potato, Ipomoea trifida (H. B. K.) G. Don.", DNA Res, 2015 Apr;22(2):171-9
  • Published online: Hirakawa H et al., "Survey of genome sequences in a wild sweet potato, Ipomoea trifida (H. B. K.) G. Don", DNA Research, 2015;22(2):171-179
SubmissionRegistration date: 28-Mar-2015
Kazusa DNA Research Institute
Related Resources
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)83036
WGS master2
SRA Experiments10
Publications
PubMed1
PMC1
Other datasets
BioSample2
Assembly2
Assembly details:
Assembly levelNumber of Assemblies
Scaffold Scaffold
Total
2
2
SRA Data Details
ParameterValue
Data volume, Gbases405
Data volume, Tbytes0.25

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