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Accession: PRJNA279568 ID: 279568

Homo sapiens (human)

Effect of the simultaneous knockdown of TET1, TET2 and TET3 on the transcriptome of HEK293 cells

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This project is a component of the Altering TET dioxygenase levels within physiological range affects DNA methylation dynamics of HEK293 cells
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4 additional projects are components of the Altering TET dioxygenase levels within physiological range affects DNA methylation dynamics of HEK293 cells.
66644 additional projects are related by organism.
We compared TET triple knockdown cells to control cells treated with non-targeting siRNAs to determine global gene expression changes. Overall design: TET triple knockdown
AccessionPRJNA279568; GEO: GSE67348
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsGrosser C et al., "Altering TET dioxygenase levels within physiological range affects DNA methylation dynamics of HEK293 cells.", Epigenetics, 2015;10(9):819-33
SubmissionRegistration date: 27-Mar-2015
Universitaetsklinikum Essen, Institut fuer Humangenetik
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Publications
PubMed1
PMC1
Other datasets
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots328050
Data volume, Processed Mbytes10
Data volume, Supplementary Mbytes34

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