This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA279558; GEO: GSE67351 |
| Type | Umbrella project |
| Publications | Grosser C et al., "Altering TET dioxygenase levels within physiological range affects DNA methylation dynamics of HEK293 cells.", Epigenetics, 2015;10(9):819-33 |
| Submission | Registration date: 27-Mar-2015
Universitaetsklinikum Essen, Institut fuer Humangenetik |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 4 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 4 |
| GEO DataSets | 6 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 984150 |
| Data volume, Processed Mbytes | 30 |
| Data volume, Supplementary Mbytes | 380 |
| Parameter | Value |
|---|
| Data volume, Gbases | 7 |
| Data volume, Mbytes | 3427 |
This project encompasses the following 5 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 3 |
BioProject
accession | Organism | Title |
|---|
| PRJNA279566 | Homo sapiens | Effect of the simultaneous knockdown of TET1, TET2 and TET3 on DNA methylation levels of HEK293 cells (Universitaetsklinikum Essen,...) | | PRJNA279567 | Homo sapiens | Effect of TET1 overexpression on DNA methylation levels of HEK293 cells (Universitaetsklinikum Essen,...) | | PRJNA280500 | Homo sapiens | Effect of TET1 overexpression on hydroxymethylcytosine levels of HEK293 cells (Universitaetsklinikum Essen,...) |
|
| Transcriptome or Gene expression | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA279568 | Homo sapiens | Effect of the simultaneous knockdown of TET1, TET2 and TET3 on the transcriptome of HEK293 cells (Universitaetsklinikum Essen,...) | | PRJNA170177 | Homo sapiens | Effect of TET1 and TET3 overexpression on the transcriptome of HEK293 cells (Universitaetsklinikum Essen,...) |
|