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Accession: PRJNA279507 ID: 279507

Mus musculus (house mouse)

Global transcriptome analysis of macrophages during Helicobacter pylori infection

See Genome Information for Mus musculus
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47588 additional projects are related by organism.
Based on preliminary data demonstrating that macrophages are critical regulators of Helicobacter pylori colonization and gastric pathology in mice, we sought to investigate how macrophages may serve as bacterial reservoirs of intracellular H. More...
AccessionPRJNA279507; GEO: GSE67270
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
Publications
  • Tubau-Juni N et al., "Identification of new regulatory genes through expression pattern analysis of a global RNA-seq dataset from a Helicobacter pylori co-culture system.", Sci Rep, 2020 Jul 13;10(1):11506
  • Philipson CW et al., "Modeling the Regulatory Mechanisms by Which NLRX1 Modulates Innate Immune Responses to Helicobacter pylori Infection.", PLoS One, 2015;10(9):e0137839
SubmissionRegistration date: 25-Mar-2015
Virginia Bioinformatics Institute, Nutritional Immunology and Molecular Medicine Laboratory
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments69
Publications
PubMed2
PMC2
Other datasets
BioSample69
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases149
Data volume, Mbytes94520

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