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Accession: PRJNA27949 ID: 27949

Pedobacter heparinus DSM 2366

Heparinase-producing bacterium

See Genome Information for Pedobacter heparinus
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This project is a component of the A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
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206 additional projects are components of the A Genomic Encyclopedia of Bacteria and Archaea (GEBA).
1 additional project is related by organism.

Pedobacter heparinus DSM 2366. Pedobacter heparinus DSM 2366 is the type strain and will be used to provide information on the production and regulation of heparinase and other polysaccharide degrading enzymes.

AccessionPRJNA27949
Data TypeGenome sequencing
ScopeMonoisolate
OrganismPedobacter heparinus DSM 2366[Taxonomy ID: 485917]
Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter; Pedobacter heparinus; Pedobacter heparinus DSM 2366
PublicationsHan C et al., "Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3).", Stand Genomic Sci, 2009 Jul 20;1(1):54-62
SubmissionRegistration date: 5-Aug-2009
US DOE Joint Genome Institute (JGI-PGF)
- JGI-PGF
- DOE Joint Genome Institute
Locus Tag PrefixPHEP
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)1
SRA Experiments6
Capillary Traces (Trace Archive)1
Protein Sequences4252
Publications
PubMed1
PMC1
Other datasets
BioSample2
Assembly1
Assembly details:
AssemblyLevelChrsBioSampleTaxonomy
GCA_000023825.1Complete genome
1
SAMN02598456
Pedobacter heparinus DSM 2366
SRA Data Details
ParameterValue
Data volume, Gbases20
Data volume, Mbytes14084

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