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Accession: PRJEB8749 ID: 279476

Whole genome sequencing of Pseudomonas aeruginosa isolates associated with industrial settings

Whole genome sequencing of Pseudomonas aeruginosa isolates adapted to a preservative combination and isolates from industrial sources

Pseudomonas aeruginosa is a common contaminant of industrial products but little is known about the species in industrial settings. More...
AccessionPRJEB8749
Data TypeGenome sequencing and assembly
ScopeMonoisolate
SubmissionRegistration date: 26-Mar-2015
CARDIFF UNIVERSITY
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)8759
WGS master96
SRA Experiments96
Other datasets
BioSample96
Assembly96
Assembly details:
Assembly levelNumber of Assemblies
Contig Contig
Total
96
96
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_001375475.1ContigCTCO00000000SAMEA3301025
15.211Bb
Pseudomonas aeruginosa
GCA_001375455.1ContigCTCN00000000SAMEA3301024
15.111c
Pseudomonas aeruginosa
GCA_001375435.1ContigCUWW00000000SAMEA3301023
15% 2
Pseudomonas aeruginosa
GCA_001375415.1ContigCUWV00000000SAMEA3301022
12.5% 3
Pseudomonas aeruginosa
GCA_001375395.1ContigCTCM00000000SAMEA3301021
10% 6
Pseudomonas aeruginosa
GCA_001375375.1ContigCTCL00000000SAMEA3301020
2.5% 7
Pseudomonas aeruginosa
GCA_001375355.1ContigCTCK00000000SAMEA3301019
TSB 8
Pseudomonas aeruginosa
GCA_001375335.1ContigCTFH00000000SAMEA3296576
12.5% 9
Pseudomonas aeruginosa
GCA_001375315.1ContigCTFF00000000SAMEA3296575
12.5% 2.1
Pseudomonas aeruginosa
GCA_001375295.1ContigCTFG00000000SAMEA3296574
10% 4
Pseudomonas aeruginosa
GCA_001375275.1ContigCUXU00000000SAMEA3296573
2.5% 5
Pseudomonas aeruginosa
GCA_001375255.1ContigCTFE00000000SAMEA3296572
TSB 6
Pseudomonas aeruginosa
GCA_001375235.1ContigCTFD00000000SAMEA3296571
RW200
Pseudomonas aeruginosa
GCA_001375215.1ContigCTFC00000000SAMEA3296570
RW168
Pseudomonas aeruginosa
GCA_001375195.1ContigCUXS00000000SAMEA3296569
RW109
Pseudomonas aeruginosa
GCA_001375175.1ContigCUXT00000000SAMEA3296568
TSB Bead Pool 2
Pseudomonas aeruginosa
GCA_001375155.1ContigCTFB00000000SAMEA3296567
15.311Ba
Pseudomonas aeruginosa
GCA_001375135.1ContigCTEW00000000SAMEA3296566
15.211 Gb
Pseudomonas aeruginosa
GCA_001375115.1ContigCTEU00000000SAMEA3296565
15% 7
Pseudomonas aeruginosa
GCA_001375095.1ContigCUXR00000000SAMEA3296564
12.5% 8
Pseudomonas aeruginosa
GCA_001375075.1ContigCUXQ00000000SAMEA3296563
12.5% 1.2
Pseudomonas aeruginosa
GCA_001375055.1ContigCTET00000000SAMEA3296562
10% 3
Pseudomonas aeruginosa
GCA_001375035.1ContigCUXP00000000SAMEA3296561
2.5% 4
Pseudomonas aeruginosa
GCA_001375015.1ContigCTES00000000SAMEA3296560
TSB 5
Pseudomonas aeruginosa
GCA_001374995.1ContigCTDV00000000SAMEA3296559
RW199
Pseudomonas aeruginosa
GCA_001374975.1ContigCTDU00000000SAMEA3296558
ATCC 9027
Pseudomonas aeruginosa
GCA_001374955.1ContigCTDW00000000SAMEA3296557
RW99
Pseudomonas aeruginosa
GCA_001374935.1ContigCTDT00000000SAMEA3296556
TSB Bead Pool 1
Pseudomonas aeruginosa
GCA_001374915.1ContigCTDR00000000SAMEA3296555
15% 6
Pseudomonas aeruginosa
GCA_001374895.1ContigCTDQ00000000SAMEA3296554
12.5% 7
Pseudomonas aeruginosa
GCA_001374875.1ContigCTDO00000000SAMEA3296553
12.5% 1.1
Pseudomonas aeruginosa
GCA_001374855.1ContigCTDB00000000SAMEA3296552
15.321Bb
Pseudomonas aeruginosa
GCA_001374835.1ContigCUXJ00000000SAMEA3296442
15.221Ba
Pseudomonas aeruginosa
GCA_001374815.1ContigCUXG00000000SAMEA3296441
15.121b
Pseudomonas aeruginosa
GCA_001374795.1ContigCUXH00000000SAMEA3296440
15% 4
Pseudomonas aeruginosa
GCA_001374775.1ContigCTDA00000000SAMEA3296439
12.5% 5
Pseudomonas aeruginosa
GCA_001374755.1ContigCTCY00000000SAMEA3296438
10% 8
Pseudomonas aeruginosa
GCA_001374735.1ContigCUXF00000000SAMEA3296437
2.5% 9
Pseudomonas aeruginosa
GCA_001374715.1ContigCTCZ00000000SAMEA3296436
2.5% 1
Pseudomonas aeruginosa
GCA_001374695.1ContigCTCX00000000SAMEA3296435
TSB 2
Pseudomonas aeruginosa
GCA_001374675.1ContigCTCW00000000SAMEA3296434
RW192
Pseudomonas aeruginosa
GCA_001374655.1ContigCTCV00000000SAMEA3296433
RW138
Pseudomonas aeruginosa
GCA_001374635.1ContigCTCU00000000SAMEA3296432
RW18
Pseudomonas aeruginosa
GCA_001374615.1ContigCUXE00000000SAMEA3296431
15.321Ba
Pseudomonas aeruginosa
GCA_001374595.1ContigCTCT00000000SAMEA3296430
15.221Ga
Pseudomonas aeruginosa
GCA_001374575.1ContigCUXC00000000SAMEA3296429
15.121a
Pseudomonas aeruginosa
GCA_001374555.1ContigCUXD00000000SAMEA3296428
15% 3
Pseudomonas aeruginosa
GCA_001374535.1ContigCTCS00000000SAMEA3296427
12.5% 4
Pseudomonas aeruginosa
GCA_001374515.1ContigCTCR00000000SAMEA3296426
10% 7
Pseudomonas aeruginosa
GCA_001374495.1ContigCUXB00000000SAMEA3296425
2.5% 8
Pseudomonas aeruginosa
GCA_001374475.1ContigCUXA00000000SAMEA3296424
TSB 9
Pseudomonas aeruginosa
GCA_001374455.1ContigCUWX00000000SAMEA3296423
RW131
Pseudomonas aeruginosa
GCA_001374435.1ContigCUWY00000000SAMEA3296422
ATCC 12903
Pseudomonas aeruginosa
GCA_001374415.1ContigCTCP00000000SAMEA3296421
15.321Gb
Pseudomonas aeruginosa
GCA_001374395.1ContigCTFO00000000SAMEA3296145
RW204
Pseudomonas aeruginosa
GCA_001374375.1ContigCUYF00000000SAMEA3296144
RW176
Pseudomonas aeruginosa
GCA_001374355.1ContigCTFM00000000SAMEA3296143
RW130
Pseudomonas aeruginosa
GCA_001374335.1ContigCUYG00000000SAMEA3296142
TSB Bead DWL Pool 2
Pseudomonas aeruginosa
GCA_001374315.1ContigCUYE00000000SAMEA3296141
15.321Ga
Pseudomonas aeruginosa
GCA_001374295.1ContigCUYB00000000SAMEA3296140
15.211Ba
Pseudomonas aeruginosa
GCA_001374275.1ContigCUYC00000000SAMEA3296139
15.111b
Pseudomonas aeruginosa
GCA_001374255.1ContigCUYD00000000SAMEA3296138
15% 1
Pseudomonas aeruginosa
GCA_001374235.1ContigCTFN00000000SAMEA3296137
12.5% 2.2
Pseudomonas aeruginosa
GCA_001374215.1ContigCTFK00000000SAMEA3296136
10% 5
Pseudomonas aeruginosa
GCA_001374195.1ContigCUYA00000000SAMEA3296135
2.5% 6
Pseudomonas aeruginosa
GCA_001374175.1ContigCUXZ00000000SAMEA3296134
TSB 7
Pseudomonas aeruginosa
GCA_001374155.1ContigCTFL00000000SAMEA3296133
RW202
Pseudomonas aeruginosa
GCA_001374135.1ContigCUXY00000000SAMEA3296132
RW172
Pseudomonas aeruginosa
GCA_001374115.1ContigCTFJ00000000SAMEA3296131
RW110
Pseudomonas aeruginosa
GCA_001374095.1ContigCUXW00000000SAMEA3296130
TSB Bead DWL Pool 1
Pseudomonas aeruginosa
GCA_001374075.1ContigCTFI00000000SAMEA3296129
15.211Gc
Pseudomonas aeruginosa
GCA_001374055.1ContigCUXV00000000SAMEA3296128
15.111a
Pseudomonas aeruginosa
GCA_001374035.1ContigCUXX00000000SAMEA3294431
15.311Bb
Pseudomonas aeruginosa
GCA_001374015.1ContigCTDS00000000SAMEA3294430
15.311Gb
Pseudomonas aeruginosa
GCA_001373995.1ContigCUXO00000000SAMEA3294429
15.211Ga
Pseudomonas aeruginosa
GCA_001373975.1ContigCTDP00000000SAMEA3294428
10% 2
Pseudomonas aeruginosa
GCA_001373955.1ContigCUXN00000000SAMEA3294427
TSB 4
Pseudomonas aeruginosa
GCA_001373935.1ContigCUXM00000000SAMEA3294426
2.5% 3
Pseudomonas aeruginosa
GCA_001373915.1ContigCTDN00000000SAMEA3294425
ATCC 15442
Pseudomonas aeruginosa
GCA_001373895.1ContigCUXL00000000SAMEA3294424
RW149
Pseudomonas aeruginosa
GCA_001373875.1ContigCTDM00000000SAMEA3294423
RW30
Pseudomonas aeruginosa
GCA_001373855.1ContigCTDL00000000SAMEA3294422
TSB Pool
Pseudomonas aeruginosa
GCA_001373835.1ContigCUXK00000000SAMEA3294421
15.311Ga
Pseudomonas aeruginosa
GCA_001373815.1ContigCUXI00000000SAMEA3294420
15.121c
Pseudomonas aeruginosa
GCA_001373795.1ContigCTDJ00000000SAMEA3294419
15% 5
Pseudomonas aeruginosa
GCA_001373775.1ContigCTDK00000000SAMEA3294418
12.5% 6
Pseudomonas aeruginosa
GCA_001373755.1ContigCTDI00000000SAMEA3294417
10% 9
Pseudomonas aeruginosa
GCA_001373735.1ContigCTDH00000000SAMEA3294416
10% 1
Pseudomonas aeruginosa
GCA_001373715.1ContigCTDG00000000SAMEA3294415
2.5% 2
Pseudomonas aeruginosa
GCA_001373695.1ContigCTDF00000000SAMEA3294414
TSB 3
Pseudomonas aeruginosa
GCA_001373675.1ContigCTDE00000000SAMEA3294413
ATCC 13388
Pseudomonas aeruginosa
GCA_001373655.1ContigCTDD00000000SAMEA3294412
RW146
Pseudomonas aeruginosa
GCA_001373635.1ContigCTDC00000000SAMEA3294411
RW27
Pseudomonas aeruginosa
GCA_001373615.1ContigCTCQ00000000SAMEA3294410
TSB 1
Pseudomonas aeruginosa
GCA_001373595.1ContigCUWZ00000000SAMEA3294409
RW184
Pseudomonas aeruginosa
GCA_900005845.1ContigCVON00000000SAMEA3301018
PA14
Pseudomonas aeruginosa
SRA Data Details
ParameterValue
Data volume, Gbases40
Data volume, Mbytes28660

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