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Accession: PRJNA279419 ID: 279419

freshwater metagenome

Stormwater, river water, and lake water Targeted Locus (Loci)

Stormwater, river water, and Lake Michigan samples collected from the metropolitan Milwaukee, WI area
AccessionPRJNA279419
Data TypeTargeted Locus (Loci)
ScopeEnvironment
Organismfreshwater metagenome[Taxonomy ID: 449393]
unclassified sequences; metagenomes; ecological metagenomes; freshwater metagenome
PublicationsFisher JC et al., "Comparison of Sewage and Animal Fecal Microbiomes by Using Oligotyping Reveals Potential Human Fecal Indicators in Multiple Taxonomic Groups.", Appl Environ Microbiol, 2015 Oct;81(20):7023-33
Grants
  • "Microbial community profiles identify new indicators of waterborne pathogens" (Grant ID R01 AI091829, National Institutes of Health)
SubmissionRegistration date: 25-Mar-2015
University of Wisconsin-Milwaukee
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments80
Publications
PubMed1
PMC1
Other datasets
BioSample80
SRA Data Details
ParameterValue
Data volume, Gbases18
Data volume, Mbytes10171

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