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Accession: PRJDB2557 ID: 279359

Drosophila melanogaster (fruit fly)

mRNA 5 end sequencing

See Genome Information for Drosophila melanogaster
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3158 additional projects are related by organism.
We describe the development of four methods of profiling mRNA 5′ ends using the Illumina sequencing platform; the first method utilizes SMART (Switching Mechanism At 5′ end of RNA Transcript) technology, while the second involves replacing the 5’ cap structure with RNA oligomers via ligation. More...
AccessionPRJDB2557; SRA: DRP001250
OrganismDrosophila melanogaster[Taxonomy ID: 7227]
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora; Drosophila melanogaster
PublicationsMachida RJ et al., "Four methods of preparing mRNA 5' end libraries using the Illumina sequencing platform.", PLoS One, 2014;9(7):e101812
SubmissionRegistration date: 24-Mar-2015
Machida Lab, Biodiversity Research Center, Academia Sinica
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments3
Publications
PubMed1
PMC1
Other datasets
BioSample1
SRA Data Details
ParameterValue
Data volume, Gbases51
Data volume, Mbytes34764

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