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Accession: PRJNA279289 ID: 279289

Homo sapiens (human)

aCGH profiling for Frozen tumour samples of 50 Hepatocellular Carcinoma patients and 14 Adjacent normal samples

See Genome Information for Homo sapiens
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This project is a component of the aCGH and RNA-Seq expression profiling of Chinese hepatocellular carcinoma patients
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1 additional project is a component of the aCGH and RNA-Seq expression profiling of Chinese hepatocellular carcinoma patients.
66644 additional projects are related by organism.
Purpose: To gain molecular insights of HBV integration that may contribute to HCC tumorigenesis, we performed whole transcriptome sequencing and whole genome copy number profiling of hepatocellular carcinoma (HCC) samples from 50 Chinese patients. More...
AccessionPRJNA279289; GEO: GSE65484
Data TypeVariation
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
Publications
  • Dong H et al., "Genomic and transcriptome profiling identified both human and HBV genetic variations and their interactions in Chinese hepatocellular carcinoma.", Genom Data, 2015 Dec;6:1-3
  • Dong H et al., "Identification of HBV-MLL4 Integration and Its Molecular Basis in Chinese Hepatocellular Carcinoma.", PLoS One, 2015;10(4):e0123175
SubmissionRegistration date: 30-Jan-2015
astrazeneca
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Publications
PubMed2
PMC2
Other datasets
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots15256640
Data volume, Processed Mbytes172
Data volume, Supplementary Mbytes4259

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