This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA279288; GEO: GSE65486 |
| Type | Umbrella project |
| Publications | - Dong H et al., "Genomic and transcriptome profiling identified both human and HBV genetic variations and their interactions in Chinese hepatocellular carcinoma.", Genom Data, 2015 Dec;6:1-3
- Dong H et al., "Identification of HBV-MLL4 Integration and Its Molecular Basis in Chinese Hepatocellular Carcinoma.", PLoS One, 2015;10(4):e0123175
|
| Submission | Registration date: 30-Jan-2015
astrazeneca |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 55 |
| Publications |
| PubMed | 2 |
| PMC | 2 |
| Other datasets |
| BioSample | 55 |
| GEO DataSets | 3 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 15256640 |
| Data volume, Processed Mbytes | 172 |
| Data volume, Supplementary Mbytes | 4263 |
| Parameter | Value |
|---|
| Data volume, Gbases | 809 |
| Data volume, Tbytes | 0.57 |
aCGH and RNA-Seq expression profiling of Chinese hepatocellular carcinoma patients encompasses the following 2 sub-projects:
| Project Type | Number of Projects |
| Transcriptome or Gene expression | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA279878 | Homo sapiens | Next Generation Sequencing Identification of HBV-MLL4 integration and its molecular basis in Chinese hepatocellular carcinoma (astrazeneca) |
|
| Variation | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA279289 | Homo sapiens | aCGH profiling for Frozen tumour samples of 50 Hepatocellular Carcinoma patients and 14 Adjacent normal samples (astrazeneca) |
|