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Accession: PRJNA279194 ID: 279194

Homo sapiens (human)

Genome-wide miRNA-expression analysis after p53 activation in colorectal cancer cells

See Genome Information for Homo sapiens
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This project is a component of the p53 in colorectal cancer cells
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2 additional projects are components of the p53 in colorectal cancer cells.
66643 additional projects are related by organism.
In order to comprehensively identify miRNA-expression changes after p53-activation a miRNA-Seq analysis was conducted after activation of a conditional p53 allele in SW480 cells. More...
AccessionPRJNA279194; GEO: GSE67181
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsHünten S et al., "p53-Regulated Networks of Protein, mRNA, miRNA, and lncRNA Expression Revealed by Integrated Pulsed Stable Isotope Labeling With Amino Acids in Cell Culture (pSILAC) and Next Generation Sequencing (NGS) Analyses.", Mol Cell Proteomics, 2015 Oct;14(10):2609-29
SubmissionRegistration date: 23-Mar-2015
Ludwig-Maximilians-Universitaet Muenchen
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments2
Publications
PubMed1
PMC1
Other datasets
BioSample2
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases3
Data volume, Mbytes2465

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