This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA279126; GEO: GSE67151 |
| Type | Umbrella project |
| Publications | McKnight JN et al., "Global Promoter Targeting of a Conserved Lysine Deacetylase for Transcriptional Shutoff during Quiescence Entry.", Mol Cell, 2015 Sep 3;59(5):732-43 |
| Submission | Registration date: 23-Mar-2015
McKnight Lab, Institute of Molecular Biology, University of Oregon |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 83 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 83 |
| GEO DataSets | 4 |
Rpd3 drives transcriptional quiescence encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA279129 | Saccharomyces cerevisiae | Genome-wide maps of nucleosome positions in purified quiescent S. cerevisiae cells [MNase-Seq] (McKnight Lab, Institute of...) | | PRJNA279130 | Saccharomyces cerevisiae | Characterization of H3 density, H3 or H4 acetylation, Rpd3 binding, TFIIB binding, and Rpb3 (pol II) binding in wild type and rpd3 cells as they transition from logarithmic growth to diauxic shift to quiescence [ChIP-Seq] (McKnight Lab, Institute of...) |
|
| Transcriptome or Gene expression | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA279128 | Saccharomyces cerevisiae | Strand-Specific RNA Sequencing for wild type and Drpd3 yeast entering quiescence [RNA-seq] (McKnight Lab, Institute of...) |
|