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Accession: PRJNA268920 ID: 268920

Amniots

Vertebrate GC3-content evolution

To better characterise and understand the evolution of GC content patterns in vertebrate coding sequences under the influence of GC-biased gene conversion (a meiotic repair bias that favours G and C over A and T alleles in high-recombining genomic regions), transcriptome analysis of five reptilian species (the golden tegu Tupinambis teguixin, the green iguana Iguana iguana, the Boa constrictor, the Jesus Christ lizard Basiliscus plumifrons and the Nile crocodile Crocodylus niloticus), two birds (the great tit Parus major and the emperor penguin Aptenodytes forsteri) and one amphibian (the fire salamander Salamandra salamandra) was carried out by RNA-Seq.
AccessionPRJNA268920
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
Grants
  • "PopPhyl" (Grant ID 232971, European Research Council)
  • "Ancestrome" (Grant ID ANR-10-BINF-01-01, Agence Nationale de la Recherche (Ancestrome))
SubmissionRegistration date: 1-Dec-2014
ISE-M (Institut des Sciences de l'Evolution de Montpellier)
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments8
Other datasets
BioSample8
SRA Data Details
ParameterValue
Data volume, Gbases24
Data volume, Mbytes14977

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    Vertebrate GC3-content evolution
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