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Accession: PRJNA233999 ID: 233999

Mus musculus (house mouse)

The Demethylase JMJD2C/KDM4C Localizes to H3K4me3 Positive Transcription Start Sites (ChIP-seq MEFs)

See Genome Information for Mus musculus
We have mapped binding sites for the histone demethylase, Jmjd2c/Kdm4c/Gasc1, in mouse embryonic fibroblasts (MEFs) and the impact of Jmjd2c depletion on H3K9me3 and H3K36me3 distributions. More...
AccessionPRJNA233999; GEO: GSE53939
Data TypeEpigenomics
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsPedersen MT et al., "The demethylase JMJD2C localizes to H3K4me3-positive transcription start sites and is dispensable for embryonic development.", Mol Cell Biol, 2014 Mar;34(6):1031-45
SubmissionRegistration date: 9-Jan-2014
Kristian Helin, University of Copenhagen, BRIC
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments7
Publications
PubMed1
PMC1
Other datasets
BioSample7
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1444
SRA Data Details
ParameterValue
Data volume, Gbases15
Data volume, Mbytes9490

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