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Accession: PRJNA231651 ID: 231651

Nannochloropsis gaditana

Chromosome Scale Genome Assembly and Transcriptome Profiling

See Genome Information for Nannochloropsis gaditana
Umbrella project linking Nannochloropsis gaditana genome sequencing project (pid:170989) and transcriptome project (pid:174770) .
AccessionPRJNA231651
TypeUmbrella project (Subtype:Single organism discovery)
OrganismNannochloropsis gaditana[Taxonomy ID: 72520]
Eukaryota; Stramenopiles; Eustigmatophyceae; Eustigmatales; Monodopsidaceae; Nannochloropsis; Nannochloropsis gaditana
PublicationsCorteggiani Carpinelli E et al., "Chromosome scale genome assembly and transcriptome profiling of Nannochloropsis gaditana in nitrogen depletion.", Mol Plant, 2013 Aug 21;7(2):323-35
SubmissionRegistration date: 13-Dec-2013
NCBI
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)2976
WGS master1
Genomic DNA2
SRA Experiments9
Protein Sequences10929
Publications
PubMed1
Other datasets
BioSample7
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases55
Data volume, Mbytes45740
Nannochloropsis gaditana encompasses the following 2 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes

1
BioProject
accession
Assembly
level
OrganismTitle
PRJNA170989 ChromosomesNannochloropsis gaditanaNannochloropsis gaditana strain:B-31 Genome sequencing (CRIBI Genomics University...)
transcriptome1
BioProject
accession
OrganismTitle
PRJNA174770Nannochloropsis gaditanaNannochloropsis gaditana strain:B-31 Transcriptome or Gene expression (CRIBI genomics University...)

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    Nannochloropsis gaditana
    Chromosome Scale Genome Assembly and Transcriptome Profiling
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