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Accession: PRJNA230858 ID: 230858

Mus musculus (house mouse)

Chromatin state in thymic epithelial cells [ChIP-seq]

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This project is a component of the Aire secures the transcription of polycomb marked genes to complete a comprehensive program of promiscuous gene expression in the thymic epithelial cell lineage
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2 additional projects are components of the Aire secures the transcription of polycomb marked genes to complete a comprehensive program of promiscuous gene expression in the thymic epithelial cell lineage.
47588 additional projects are related by organism.
The study set out to assess the genome-wide distribution of the chromatin modifications H3K4me3 and H3K27me3 in mature thymic epithelial cells. More...
AccessionPRJNA230858; GEO: GSE53109
Data TypeEpigenomics
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsSansom SN et al., "Population and single-cell genomics reveal the Aire dependency, relief from Polycomb silencing, and distribution of self-antigen expression in thymic epithelia.", Genome Res, 2014 Dec;24(12):1918-31
SubmissionRegistration date: 6-Dec-2013
Sansom, NDORMS, Kennedy Institute of Rheumatology
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
PMC1
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2876
SRA Data Details
ParameterValue
Data volume, Gbases34
Data volume, Mbytes22427

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