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Accession: PRJNA229411 ID: 229411

Mus musculus (house mouse)

High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult)

See Genome Information for Mus musculus
We used microfluidic single cell RNA-seq on 198 individual mouse lung epithelial cells at 4 different stages throughout development to measure the transcriptional states which define the developmental and cellular hierarchy of the distal mouse lung epithelium. More...
AccessionPRJNA229411; GEO: GSE52583
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsTreutlein B et al., "Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq.", Nature, 2014 May 15;509(7500):371-5
SubmissionRegistration date: 20-Nov-2013
Quake, Bioengineering, Stanford University
RelevanceModel Organism
Project Data:
Resource NameNumber
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Sequence data
SRA Experiments201
Publications
PubMed1
PMC1
Other datasets
BioSample201
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes118
SRA Data Details
ParameterValue
Data volume, Gbases99
Data volume, Mbytes70678

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    Mus musculus
    High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult)
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