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Accession: PRJNA20953 ID: 20953

Yellowstone National Park Octopus/Mushroom Hot Springs Metagenome

DNA was purified from a microbial mat core taken from two different hot springs in Yellowstone National Park.
AccessionPRJNA20953
TypeUmbrella Metagenome project (Subtype:Metagenome)
Organismhot springs metagenome[Taxonomy ID: 433727]
unclassified sequences; metagenomes; ecological metagenomes; hot springs metagenome
SubmissionRegistration date: 3-Oct-2007
JCVI
NCBI Links
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)85
WGS master2
Genomic DNA3
SRA Experiments10
Capillary Traces (Trace Archive)1
Protein Sequences2870
Publications
PubMed2
PMC1
Other datasets
BioSample3
Assembly2
SRA Data Details
ParameterValue
Data volume, Mbases27
Data volume, Mbytes1035
Yellowstone National Park Octopus/Mushroom Hot Springs Metagenome encompasses the following 7 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Scaffolds

1
BioProject
accession
Assembly
level
OrganismTitle
PRJNA68063 Scaffoldshot springs metagenomeMetagenome from Yellowstone National Park (YNP) combined Mushroom and Octopus hot springs (JCVI)
Metagenome6
BioProject
accession
OrganismTitle
PRJNA20717hot springs metagenomeMetagenome from Yellowstone National Park (YNP) Mushroom Springs Mat Core A (JCVI)
PRJNA20719hot springs metagenomeMetagenome from Yellowstone National Park (YNP) Mushroom Springs Mat Core B (JCVI)
PRJNA20721hot springs metagenomeMetagenome from Yellowstone National Park (YNP) Mushroom Springs Mat Core D (JCVI)
PRJNA20723hot springs metagenomeMetagenome from Yellowstone National Park (YNP) Mushroom Springs Mat Core F (JCVI)
PRJNA20725hot springs metagenomeMetagenome from Yellowstone National Park (YNP) Octopus Springs Mat Core F (JCVI)
List all 6 'Metagenome' projects...

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