Sign in to NCBI

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA19049 ID: 19049

Pseudocercospora fijiensis CIRAD86

WGS sequencing, assembly, and annotation

See Genome Information for Pseudocercospora fijiensis
Navigate Across
6 additional projects are related by organism.
The Department of Energy (DOE) Joint Genome Institute (JGI) sequenced the Mycosphaerella fijiensis strain CIRAD86 genome at 7.1X coverage using whole genome shotgun (WGS) sequencing. They annotated the genome using the JGI annotation pipeline.
AccessionPRJNA19049
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismPseudocercospora fijiensis CIRAD86[Taxonomy ID: 383855]
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Mycosphaerellales; Mycosphaerellaceae; Pseudocercospora; Pseudocercospora fijiensis; Pseudocercospora fijiensis CIRAD86
PublicationsOhm RA et al., "Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen Dothideomycetes fungi.", PLoS Pathog, 2012;8(12):e1003037
SubmissionRegistration date: 11-Feb-2013
DOE Joint Genome Institute
Locus Tag PrefixMYCFI
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)57
WGS master1
SRA Experiments14
Protein Sequences13066
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
SRA Data Details
ParameterValue
Data volume, Gbases112
Data volume, Mbytes72621
Related RefSeq Project
PRJNA245146 : Pseudocercospora fijiensis CIRAD86 RefSeq Genome

Supplemental Content

Related information

LinkOut to external resources

Recent activity

Clear Turn Off Turn On
  • riverine metagenome
    riverine metagenome
    Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8d
    BioProject
  • Streptococcus intermedius
    Streptococcus intermedius
    Streptococcus intermedius Genome sequencing and assembly
    BioProject
  • Pseudocercospora fijiensis CIRAD86
    Pseudocercospora fijiensis CIRAD86
    WGS sequencing, assembly, and annotation
    BioProject
  • Methylobacterium nodulans ORS 2060
    Methylobacterium nodulans ORS 2060
    Nitrogen-fixing methylotroph
    BioProject
  • leaf litter metagenome
    leaf litter metagenome
    Leaf litter microbial communities from grasslands in Loma Ridge, Limestone Canyon Regional Park, California, United States - STA_Feb11_03RX_9_E8 metagenome
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI
Support Center