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Accession: PRJEA18785 ID: 18785

Vitis vinifera strain:PN40024 (wine grape)

grape genome generated by IGGP consortium

See Genome Information for Vitis vinifera
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338 additional projects are related by organism.
The French-Italian public consortium has decided to determine the sequence of Pinot Noir PN40024, a homozygotic cultivar, at 12X coverage. A draft 8x coverage has been published.
AccessionPRJEA18785
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismVitis vinifera[Taxonomy ID: 29760]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera
Publications
  • Jaillon O et al., "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.", Nature, 2007 Sep 27;449(7161):463-7
  • Jansen RK et al., "Phylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids.", BMC Evol Biol, 2006 Apr 9;6:32
SubmissionRegistration date: 23-Feb-2007
International Grape Genome Program
- Applied Genomics
- Vitis Genome
- Genoscope
Related Resources
Locus Tag PrefixVIT
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)2093
WGS master1
Genomic DNA33
Protein Sequences26346
Publications
PubMed2
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCA_000003745.2ChromosomeCAAP00000000
19
SAMEA2272750
Vitis vinifera
Related RefSeq Project
PRJNA33471 : cultivated wine grape

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