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Accession: PRJNA17783 ID: 17783

Coccidioides posadasii RMSCC 3488

WGS sequencing and assembly

See Genome Information for Coccidioides posadasii
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This project is a component of the Comparative genomic study of multiple strains of Coccidioides immitis and posadasii
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17 additional projects are related by organism.
12 additional projects are components of the Comparative genomic study of multiple strains of Coccidioides immitis and posadasii.
The Broad Institute sequenced the Coccidioides posadasii strain RMSCC 3488 genome at 8.5X coverage using whole genome shotgun (WGS) sequencing. Release 1 of the genome assembly consists of 284 contigs in 6 scaffolds, and 3 mitochondrial contigs in 3 scaffolds.
AccessionPRJNA17783
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismCoccidioides posadasii RMSCC 3488[Taxonomy ID: 454284]
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides; Coccidioides posadasii; Coccidioides posadasii RMSCC 3488
Publications
  • Neafsey DE et al., "Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control.", Genome Res, 2010 Jul;20(7):938-46
  • Sharpton TJ et al., "Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives.", Genome Res, 2009 Oct;19(10):1722-31
SubmissionRegistration date: 12-Jul-2007
Broad Institute
Related Resources
Locus Tag PrefixCPAG
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)10
WGS master1
Protein Sequences9964
Publications
PubMed2
PMC2
Other datasets
BioSample1
Assembly1
Assembly details:

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