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Accession: PRJNA174865 ID: 174865

Mus musculus (house mouse)

Dynamic changes in liver 5-hydroxymethylcytosine profiles upon non-genotoxic carcinogen exposure

See Genome Information for Mus musculus
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This project is a component of the IP of 5-hydroxymethylcytosine (5-hmC) and 5-methylcytosine (5-mC) enriched DNA fragments from control and PB treated mouse livers
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10 additional projects are components of the IP of 5-hydroxymethylcytosine (5-hmC) and 5-methylcytosine (5-mC) enriched DNA fragments from control and PB treated mouse livers.
47588 additional projects are related by organism.
29-32 days old male mice where either treated with Phenobarbital or untreated Overall design: Replicated control vs. pb treated study
AccessionPRJNA174865; GEO: GSE40773
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
Publications (total 3)
  • Thomson JP et al., "DNA immunoprecipitation semiconductor sequencing (DIP-SC-seq) as a rapid method to generate genome wide epigenetic signatures.", Sci Rep, 2015 May 14;5:9778
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SubmissionRegistration date: 11-Sep-2012
Meehan, MRC Human Genetics Unit, University of Edinburgh
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Publications
PubMed3
PMC3
Other datasets
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots451010
Data volume, Processed Mbytes8
Data volume, Supplementary Mbytes36

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