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Accession: PRJDB503 ID: 174854

Genome projects for evolutional studies of the family Acetobacteraceae

We are pursuing a research project to comprehend the evolutional status of the family Acetobacteraceae based on genome analyses. First 18 bacterial genomes were projected to read the genome DNA sequences. We will provide data of more bacterial genome and moreover transcriptome by mRNA sequencing.
AccessionPRJDB503
TypeUmbrella project
OrganismAcetobacteraceae[Taxonomy ID: 433]
Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae
PublicationsHigashiura N et al., "Draft Genomic DNA Sequence of the Facultatively Methylotrophic Bacterium Acidomonas methanolica type strain MB58.", FEMS Microbiol Lett, 2014 Feb 1;351(1):9-13
Grants
  • "Applied studies for biomass utilization based on genome analyses of acetic acid bacteria exhibiting specific metabolic traits." (Grant ID 2251022, Scientific Research from the Ministry of Education, Culture, Sports, Science and Technology of Japan)
SubmissionRegistration date: 10-Sep-2012
Kinki University
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)6930
WGS master17
Genomic DNA1
Protein Sequences54490
Publications
PubMed2
PMC1
Other datasets
BioSample18
Assembly18
Assembly details:
This project encompasses the following 18 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
No data links

4
BioProject
accession		Assembly
level		OrganismTitle
PRJDB505 No data linksAcetobacter cibinongensis NRIC 0482Acetobacter cibinongensis (Kinki University)
PRJDB506 No data linksAcetobacter indonesiensis NRIC 0313Acetobacter indonesiensis (Kinki University)
PRJDB507 No data linksAcetobacter orientalisAcetobacter orientalis (Kinki University)
PRJDB509 No data linksAcetobacter syzygiiAcetobacter syzygii (Kinki University)
Phenotype or Genotype14
BioProject
accession		OrganismTitle
PRJDB504Acetobacter aceti NBRC 14818Acetobacter aceti (Kinki University)
PRJDB508Acetobacter orleanensis JCM 7639Acetobacter orleanensis (Kinki University)
PRJDB510Acidiphilium multivorum AIU301Acidiphilium multivorum (Kinki University)
PRJDB511Acidisphaera rubrifaciens HS-AP3Acidisphaera rubrifaciens (Kinki University)
PRJDB512Acidocella aminolytica 101 = DSM 11237Acidocella aminolytica (Kinki University)
List all 14 'Phenotype or Genotype' projects...

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